STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sync_1638Heavy metal ABC transporter (HMT) family, permease/ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664. (583 aa)    
Predicted Functional Partners:
sync_1939
ABC transporter, permease/ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664.
  
  
 
0.924
sync_0156
Polyketide synthase, putative; Identified by match to protein family HMM PF00106; match to protein family HMM PF00107; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02801; match to protein family HMM PF07993; match to protein family HMM TIGR01746.
  
 0.891
hlyB
ABC transporter, multi drug efflux family protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664; match to protein family HMM TIGR01846.
 
 
0.681
sync_0219
ATP-binding ABC transporter family protein; Identified by match to protein family HMM PF00005.
 
 
  
0.667
sync_0452
Putative molybdopterin biosynthesis protein MoeB; Identified by match to protein family HMM PF00581; match to protein family HMM PF00899; match to protein family HMM PF05237.
  
 0.616
sync_1215
ABC transporter, ATP-binding protein domain protein; Identified by match to protein family HMM PF00005.
 
 
  
0.605
sync_0154
Membrane protein, putative.
  
 
 0.601
sync_2130
Drug exporter-1 ABC transporter (DrugE1) family, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM TIGR01188.
 
0.600
sync_1639
Conserved hypothetical protein; Identified by similarity to GB:CAE20668.1.
       0.588
sync_2868
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
 
    
0.552
Your Current Organism:
Synechococcus sp. CC9311
NCBI taxonomy Id: 64471
Other names: S. sp. CC9311
Server load: low (16%) [HD]