Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
sync_1690Conserved hypothetical protein; Identified by similarity to GB:CAE07636.1. (183 aa)    
Predicted Functional Partners:
sync_1691
Conserved hypothetical protein; Identified by similarity to GB:AAP99890.1.
       0.812
gnd
6-phosphogluconate dehydrogenase, decarboxylating; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.
       0.789
sync_2028
Conserved hypothetical protein; Identified by similarity to GB:CAE08294.1.
  
     0.757
pgl
6-phosphogluconolactonase; Hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate.
       0.752
sync_1581
Identified by match to protein family HMM PF05419.
  
     0.744
sync_2568
Zeta-carotene desaturase; Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7'.
  
     0.743
sync_2612
Conserved NnrU/NnuR ortholog membrane enzyme.
  
     0.743
sync_1555
Conserved hypothetical protein; Identified by similarity to GB:CAE20563.1; match to protein family HMM PF07082.
  
     0.739
sync_1994
Identified by match to protein family HMM PF06485.
  
     0.715
psbO
Photosystem II manganese-stabilizing protein; Identified by match to protein family HMM PF01716.
  
     0.706
Your Current Organism:
Synechococcus sp. CC9311
NCBI taxonomy Id: 64471
Other names: S. sp. CC9311
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