Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 annotation | node2 annotation | score |
| sync_1437 | sync_1438 | Predicted exonuclease involved in mRNA processing. | Possible ATP-dependent DNA ligase; Identified by match to protein family HMM PF01068; match to protein family HMM PF04679. | 0.994 |
| sync_1437 | sync_1439 | Predicted exonuclease involved in mRNA processing. | ATP-dependent helicase, DEAD/DEAH box family protein; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271. | 0.886 |
| sync_1437 | sync_1732 | Predicted exonuclease involved in mRNA processing. | Serine/threonine specific protein phosphatase; Identified by match to protein family HMM PF00149. | 0.800 |
| sync_1438 | sync_1437 | Possible ATP-dependent DNA ligase; Identified by match to protein family HMM PF01068; match to protein family HMM PF04679. | Predicted exonuclease involved in mRNA processing. | 0.994 |
| sync_1438 | sync_1439 | Possible ATP-dependent DNA ligase; Identified by match to protein family HMM PF01068; match to protein family HMM PF04679. | ATP-dependent helicase, DEAD/DEAH box family protein; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271. | 0.885 |
| sync_1438 | sync_1732 | Possible ATP-dependent DNA ligase; Identified by match to protein family HMM PF01068; match to protein family HMM PF04679. | Serine/threonine specific protein phosphatase; Identified by match to protein family HMM PF00149. | 0.813 |
| sync_1439 | sync_1437 | ATP-dependent helicase, DEAD/DEAH box family protein; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271. | Predicted exonuclease involved in mRNA processing. | 0.886 |
| sync_1439 | sync_1438 | ATP-dependent helicase, DEAD/DEAH box family protein; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271. | Possible ATP-dependent DNA ligase; Identified by match to protein family HMM PF01068; match to protein family HMM PF04679. | 0.885 |
| sync_1439 | sync_1732 | ATP-dependent helicase, DEAD/DEAH box family protein; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271. | Serine/threonine specific protein phosphatase; Identified by match to protein family HMM PF00149. | 0.817 |
| sync_1731 | sync_1732 | Proline-rich region. | Serine/threonine specific protein phosphatase; Identified by match to protein family HMM PF00149. | 0.773 |
| sync_1731 | sync_1733 | Proline-rich region. | Hypothetical protein; Identified by Glimmer2; putative. | 0.572 |
| sync_1731 | sync_1734 | Proline-rich region. | Possible ligand gated channel (GIC family); Identified by match to protein family HMM PF00497; match to protein family HMM PF07885. | 0.500 |
| sync_1732 | sync_1437 | Serine/threonine specific protein phosphatase; Identified by match to protein family HMM PF00149. | Predicted exonuclease involved in mRNA processing. | 0.800 |
| sync_1732 | sync_1438 | Serine/threonine specific protein phosphatase; Identified by match to protein family HMM PF00149. | Possible ATP-dependent DNA ligase; Identified by match to protein family HMM PF01068; match to protein family HMM PF04679. | 0.813 |
| sync_1732 | sync_1439 | Serine/threonine specific protein phosphatase; Identified by match to protein family HMM PF00149. | ATP-dependent helicase, DEAD/DEAH box family protein; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271. | 0.817 |
| sync_1732 | sync_1731 | Serine/threonine specific protein phosphatase; Identified by match to protein family HMM PF00149. | Proline-rich region. | 0.773 |
| sync_1732 | sync_1733 | Serine/threonine specific protein phosphatase; Identified by match to protein family HMM PF00149. | Hypothetical protein; Identified by Glimmer2; putative. | 0.572 |
| sync_1732 | sync_1734 | Serine/threonine specific protein phosphatase; Identified by match to protein family HMM PF00149. | Possible ligand gated channel (GIC family); Identified by match to protein family HMM PF00497; match to protein family HMM PF07885. | 0.500 |
| sync_1733 | sync_1731 | Hypothetical protein; Identified by Glimmer2; putative. | Proline-rich region. | 0.572 |
| sync_1733 | sync_1732 | Hypothetical protein; Identified by Glimmer2; putative. | Serine/threonine specific protein phosphatase; Identified by match to protein family HMM PF00149. | 0.572 |
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