sync_1734 protein (Synechococcus sp. CC9311)

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Score

sync_1734

Possible ligand gated channel (GIC family); Identified by match to protein family HMM PF00497; match to protein family HMM PF07885. (349 aa)

Predicted Functional Partners:

sync_1733

0.668

sync_1731

0.500

sync_1732

0.500

sync_2671

0.465

sync_0387

0.461

sync_0573

0.421

sync_1079

0.402

sync_1187

0.402

Your Current Organism:

Synechococcus sp. CC9311

NCBI taxonomy Id: 64471
Other names: S. sp. CC9311

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
sync_0387	sync_0573	Ferredoxin-dependent glutamate synthase, Fd-GOGAT; Identified by match to protein family HMM PF00310; match to protein family HMM PF00478; match to protein family HMM PF01493; match to protein family HMM PF01645; match to protein family HMM PF04898.	Two-component hybrid sensor and regulator alr4878, putative; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518.	0.686
sync_0387	sync_1079	Ferredoxin-dependent glutamate synthase, Fd-GOGAT; Identified by match to protein family HMM PF00310; match to protein family HMM PF00478; match to protein family HMM PF01493; match to protein family HMM PF01645; match to protein family HMM PF04898.	Sensory box histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF02518.	0.664
sync_0387	sync_1187	Ferredoxin-dependent glutamate synthase, Fd-GOGAT; Identified by match to protein family HMM PF00310; match to protein family HMM PF00478; match to protein family HMM PF01493; match to protein family HMM PF01645; match to protein family HMM PF04898.	Polar amino amino acid ABC transporter (PAAT) family, permease protein; Identified by similarity to SP:Q52814; match to protein family HMM PF00528; match to protein family HMM TIGR01726.	0.526
sync_0387	sync_1734	Ferredoxin-dependent glutamate synthase, Fd-GOGAT; Identified by match to protein family HMM PF00310; match to protein family HMM PF00478; match to protein family HMM PF01493; match to protein family HMM PF01645; match to protein family HMM PF04898.	Possible ligand gated channel (GIC family); Identified by match to protein family HMM PF00497; match to protein family HMM PF07885.	0.461
sync_0387	sync_2671	Ferredoxin-dependent glutamate synthase, Fd-GOGAT; Identified by match to protein family HMM PF00310; match to protein family HMM PF00478; match to protein family HMM PF01493; match to protein family HMM PF01645; match to protein family HMM PF04898.	Identified by match to protein family HMM PF00563; match to protein family HMM PF00990; match to protein family HMM TIGR00254.	0.497
sync_0573	sync_0387	Two-component hybrid sensor and regulator alr4878, putative; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518.	Ferredoxin-dependent glutamate synthase, Fd-GOGAT; Identified by match to protein family HMM PF00310; match to protein family HMM PF00478; match to protein family HMM PF01493; match to protein family HMM PF01645; match to protein family HMM PF04898.	0.686
sync_0573	sync_1079	Two-component hybrid sensor and regulator alr4878, putative; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518.	Sensory box histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF02518.	0.999
sync_0573	sync_1734	Two-component hybrid sensor and regulator alr4878, putative; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518.	Possible ligand gated channel (GIC family); Identified by match to protein family HMM PF00497; match to protein family HMM PF07885.	0.421
sync_0573	sync_2671	Two-component hybrid sensor and regulator alr4878, putative; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518.	Identified by match to protein family HMM PF00563; match to protein family HMM PF00990; match to protein family HMM TIGR00254.	0.989
sync_1079	sync_0387	Sensory box histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF02518.	Ferredoxin-dependent glutamate synthase, Fd-GOGAT; Identified by match to protein family HMM PF00310; match to protein family HMM PF00478; match to protein family HMM PF01493; match to protein family HMM PF01645; match to protein family HMM PF04898.	0.664
sync_1079	sync_0573	Sensory box histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF02518.	Two-component hybrid sensor and regulator alr4878, putative; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518.	0.999
sync_1079	sync_1734	Sensory box histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF02518.	Possible ligand gated channel (GIC family); Identified by match to protein family HMM PF00497; match to protein family HMM PF07885.	0.402
sync_1079	sync_2671	Sensory box histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF02518.	Identified by match to protein family HMM PF00563; match to protein family HMM PF00990; match to protein family HMM TIGR00254.	0.901
sync_1187	sync_0387	Polar amino amino acid ABC transporter (PAAT) family, permease protein; Identified by similarity to SP:Q52814; match to protein family HMM PF00528; match to protein family HMM TIGR01726.	Ferredoxin-dependent glutamate synthase, Fd-GOGAT; Identified by match to protein family HMM PF00310; match to protein family HMM PF00478; match to protein family HMM PF01493; match to protein family HMM PF01645; match to protein family HMM PF04898.	0.526
sync_1187	sync_1734	Polar amino amino acid ABC transporter (PAAT) family, permease protein; Identified by similarity to SP:Q52814; match to protein family HMM PF00528; match to protein family HMM TIGR01726.	Possible ligand gated channel (GIC family); Identified by match to protein family HMM PF00497; match to protein family HMM PF07885.	0.402
sync_1731	sync_1732	Proline-rich region.	Serine/threonine specific protein phosphatase; Identified by match to protein family HMM PF00149.	0.773
sync_1731	sync_1733	Proline-rich region.	Hypothetical protein; Identified by Glimmer2; putative.	0.572
sync_1731	sync_1734	Proline-rich region.	Possible ligand gated channel (GIC family); Identified by match to protein family HMM PF00497; match to protein family HMM PF07885.	0.500
sync_1732	sync_1731	Serine/threonine specific protein phosphatase; Identified by match to protein family HMM PF00149.	Proline-rich region.	0.773
sync_1732	sync_1733	Serine/threonine specific protein phosphatase; Identified by match to protein family HMM PF00149.	Hypothetical protein; Identified by Glimmer2; putative.	0.572