STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sync_1751Conserved hypothetical protein. (235 aa)    
Predicted Functional Partners:
sync_1752
Putative permease; Identified by match to protein family HMM PF03773.
 
  
 0.970
cytA-2
Cytochrome c, class IC:Cytochrome c, class I; Identified by match to protein family HMM PF00034.
 
     0.772
sync_2274
Ferredoxin-thioredoxin reductase variable chain.
  
     0.725
sync_0351
Conserved hypothetical protein; Identified by similarity to GB:CAE06815.1.
  
     0.710
sync_0757
Conserved hypothetical protein.
  
     0.677
sync_2942
Uncharacterized membrane protein.
  
     0.654
sync_1750
Conserved hypothetical protein.
       0.650
sync_0642
Conserved hypothetical protein.
  
     0.638
sync_0591
Membrane protein, putative.
  
     0.628
sync_1748
ABC transporter component, possibly Mn transport; Identified by match to protein family HMM PF00950.
       0.620
Your Current Organism:
Synechococcus sp. CC9311
NCBI taxonomy Id: 64471
Other names: S. sp. CC9311
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.