STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sync_1754Putative membrane protein; Identified by similarity to GB:CAE20407.1. (210 aa)    
Predicted Functional Partners:
hli-2
Lhc-like protein Lhl4.
  
     0.750
hli-4
Lhc-like protein Lhl4.
  
     0.750
hli-1
Ferrochelatase.
  
     0.720
sync_1102
Uncharacterized conserved membrane protein; Identified by match to protein family HMM PF07681.
  
     0.714
hli-3
Lhc-like protein Lhl4.
  
     0.708
sync_2304
CAB/ELIP/HLIP family protein.
  
     0.702
sync_0733
Uncharacterized secreted or membrane protein.
  
     0.690
sync_1540
Bacterial regulatory proteins, Crp family protein.
  
     0.658
sync_0598
Uncharacterized protein.
  
     0.611
sync_1816
Predicted membrane protein; Identified by match to protein family HMM PF07681.
  
     0.600
Your Current Organism:
Synechococcus sp. CC9311
NCBI taxonomy Id: 64471
Other names: S. sp. CC9311
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