Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 annotation | node2 annotation | score |
| sync_1755 | sync_1756 | Hypothetical protein; Identified by Glimmer2; putative. | ABC transporter component, possibly Mn transport; Identified by match to protein family HMM PF00950. | 0.714 |
| sync_1755 | sync_1757 | Hypothetical protein; Identified by Glimmer2; putative. | Iron chelate ABC transporter (FeCT) family, ATP-binding protein; Identified by match to protein family HMM PF00005. | 0.714 |
| sync_1755 | sync_1758 | Hypothetical protein; Identified by Glimmer2; putative. | Cation ABC transporter, cation-binding protein; Identified by match to protein family HMM PF01297; Belongs to the bacterial solute-binding protein 9 family. | 0.689 |
| sync_1755 | sync_1759 | Hypothetical protein; Identified by Glimmer2; putative. | Conserved hypothetical protein; Identified by similarity to GB:BAB75622.1. | 0.499 |
| sync_1756 | sync_1755 | ABC transporter component, possibly Mn transport; Identified by match to protein family HMM PF00950. | Hypothetical protein; Identified by Glimmer2; putative. | 0.714 |
| sync_1756 | sync_1757 | ABC transporter component, possibly Mn transport; Identified by match to protein family HMM PF00950. | Iron chelate ABC transporter (FeCT) family, ATP-binding protein; Identified by match to protein family HMM PF00005. | 0.998 |
| sync_1756 | sync_1758 | ABC transporter component, possibly Mn transport; Identified by match to protein family HMM PF00950. | Cation ABC transporter, cation-binding protein; Identified by match to protein family HMM PF01297; Belongs to the bacterial solute-binding protein 9 family. | 0.998 |
| sync_1756 | sync_1759 | ABC transporter component, possibly Mn transport; Identified by match to protein family HMM PF00950. | Conserved hypothetical protein; Identified by similarity to GB:BAB75622.1. | 0.537 |
| sync_1757 | sync_1755 | Iron chelate ABC transporter (FeCT) family, ATP-binding protein; Identified by match to protein family HMM PF00005. | Hypothetical protein; Identified by Glimmer2; putative. | 0.714 |
| sync_1757 | sync_1756 | Iron chelate ABC transporter (FeCT) family, ATP-binding protein; Identified by match to protein family HMM PF00005. | ABC transporter component, possibly Mn transport; Identified by match to protein family HMM PF00950. | 0.998 |
| sync_1757 | sync_1758 | Iron chelate ABC transporter (FeCT) family, ATP-binding protein; Identified by match to protein family HMM PF00005. | Cation ABC transporter, cation-binding protein; Identified by match to protein family HMM PF01297; Belongs to the bacterial solute-binding protein 9 family. | 0.994 |
| sync_1757 | sync_1759 | Iron chelate ABC transporter (FeCT) family, ATP-binding protein; Identified by match to protein family HMM PF00005. | Conserved hypothetical protein; Identified by similarity to GB:BAB75622.1. | 0.537 |
| sync_1758 | sync_1755 | Cation ABC transporter, cation-binding protein; Identified by match to protein family HMM PF01297; Belongs to the bacterial solute-binding protein 9 family. | Hypothetical protein; Identified by Glimmer2; putative. | 0.689 |
| sync_1758 | sync_1756 | Cation ABC transporter, cation-binding protein; Identified by match to protein family HMM PF01297; Belongs to the bacterial solute-binding protein 9 family. | ABC transporter component, possibly Mn transport; Identified by match to protein family HMM PF00950. | 0.998 |
| sync_1758 | sync_1757 | Cation ABC transporter, cation-binding protein; Identified by match to protein family HMM PF01297; Belongs to the bacterial solute-binding protein 9 family. | Iron chelate ABC transporter (FeCT) family, ATP-binding protein; Identified by match to protein family HMM PF00005. | 0.994 |
| sync_1758 | sync_1759 | Cation ABC transporter, cation-binding protein; Identified by match to protein family HMM PF01297; Belongs to the bacterial solute-binding protein 9 family. | Conserved hypothetical protein; Identified by similarity to GB:BAB75622.1. | 0.554 |
| sync_1759 | sync_1755 | Conserved hypothetical protein; Identified by similarity to GB:BAB75622.1. | Hypothetical protein; Identified by Glimmer2; putative. | 0.499 |
| sync_1759 | sync_1756 | Conserved hypothetical protein; Identified by similarity to GB:BAB75622.1. | ABC transporter component, possibly Mn transport; Identified by match to protein family HMM PF00950. | 0.537 |
| sync_1759 | sync_1757 | Conserved hypothetical protein; Identified by similarity to GB:BAB75622.1. | Iron chelate ABC transporter (FeCT) family, ATP-binding protein; Identified by match to protein family HMM PF00005. | 0.537 |
| sync_1759 | sync_1758 | Conserved hypothetical protein; Identified by similarity to GB:BAB75622.1. | Cation ABC transporter, cation-binding protein; Identified by match to protein family HMM PF01297; Belongs to the bacterial solute-binding protein 9 family. | 0.554 |
page 1 of 2