STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sync_1775Steroid 5-alpha reductase, C-terminal domain, putative. (209 aa)    
Predicted Functional Partners:
sync_1776
Conserved hypothetical protein; Identified by similarity to GB:CAE07903.1; match to protein family HMM PF03733.
       0.757
sync_1777
Hypothetical protein; Identified by Glimmer2; putative.
       0.654
sync_1040
Conserved hypothetical protein.
  
     0.648
sync_1451
Conserved hypothetical protein.
  
     0.636
sync_2123
Membrane protein, putative.
  
     0.539
sync_0891
Putative membrane protein; Identified by match to protein family HMM PF00892.
  
     0.534
sync_2646
Unnamed protein product.
  
     0.533
sync_1188
Conserved hypothetical protein.
  
     0.530
sync_0118
Conserved hypothetical protein.
  
     0.489
sync_1833
Conserved hypothetical protein; Identified by similarity to GB:CAE19449.1.
  
     0.487
Your Current Organism:
Synechococcus sp. CC9311
NCBI taxonomy Id: 64471
Other names: S. sp. CC9311
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.