Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| hli-2 | kaiA | sync_2075 | sync_2222 | Lhc-like protein Lhl4. | Circadian clock protein KaiA; Component of the kaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria. The kaiABC complex may act as a promoter-nonspecific transcription regulator that represses transcription, possibly by acting on the state of chromosome compaction. In the complex, it enhances the phosphorylation status of kaiC. In contrast, the presence of kaiB in the complex decreases the phosphorylation status of kaiC, suggesting that kaiB acts by antagonizing the interaction between kaiA and kaiC. A kaiA dimer is sufficient to enhance kaiC he [...] | 0.666 |
| hli-2 | sync_1538 | sync_2075 | sync_1538 | Lhc-like protein Lhl4. | Predicted HTH of cAMP family transcriptional regulator, putative; Identified by match to protein family HMM PF00325. | 0.656 |
| hli-2 | sync_1805 | sync_2075 | sync_1805 | Lhc-like protein Lhl4. | Conserved hypothetical protein. | 0.615 |
| hli-2 | sync_2084 | sync_2075 | sync_2084 | Lhc-like protein Lhl4. | Conserved hypothetical protein. | 0.547 |
| hli-4 | kaiA | sync_2528 | sync_2222 | Lhc-like protein Lhl4. | Circadian clock protein KaiA; Component of the kaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria. The kaiABC complex may act as a promoter-nonspecific transcription regulator that represses transcription, possibly by acting on the state of chromosome compaction. In the complex, it enhances the phosphorylation status of kaiC. In contrast, the presence of kaiB in the complex decreases the phosphorylation status of kaiC, suggesting that kaiB acts by antagonizing the interaction between kaiA and kaiC. A kaiA dimer is sufficient to enhance kaiC he [...] | 0.713 |
| hli-4 | sync_1538 | sync_2528 | sync_1538 | Lhc-like protein Lhl4. | Predicted HTH of cAMP family transcriptional regulator, putative; Identified by match to protein family HMM PF00325. | 0.660 |
| hli-4 | sync_1805 | sync_2528 | sync_1805 | Lhc-like protein Lhl4. | Conserved hypothetical protein. | 0.645 |
| hli-4 | sync_2084 | sync_2528 | sync_2084 | Lhc-like protein Lhl4. | Conserved hypothetical protein. | 0.541 |
| kaiA | hli-2 | sync_2222 | sync_2075 | Circadian clock protein KaiA; Component of the kaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria. The kaiABC complex may act as a promoter-nonspecific transcription regulator that represses transcription, possibly by acting on the state of chromosome compaction. In the complex, it enhances the phosphorylation status of kaiC. In contrast, the presence of kaiB in the complex decreases the phosphorylation status of kaiC, suggesting that kaiB acts by antagonizing the interaction between kaiA and kaiC. A kaiA dimer is sufficient to enhance kaiC he [...] | Lhc-like protein Lhl4. | 0.666 |
| kaiA | hli-4 | sync_2222 | sync_2528 | Circadian clock protein KaiA; Component of the kaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria. The kaiABC complex may act as a promoter-nonspecific transcription regulator that represses transcription, possibly by acting on the state of chromosome compaction. In the complex, it enhances the phosphorylation status of kaiC. In contrast, the presence of kaiB in the complex decreases the phosphorylation status of kaiC, suggesting that kaiB acts by antagonizing the interaction between kaiA and kaiC. A kaiA dimer is sufficient to enhance kaiC he [...] | Lhc-like protein Lhl4. | 0.713 |
| kaiA | sync_0392 | sync_2222 | sync_0392 | Circadian clock protein KaiA; Component of the kaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria. The kaiABC complex may act as a promoter-nonspecific transcription regulator that represses transcription, possibly by acting on the state of chromosome compaction. In the complex, it enhances the phosphorylation status of kaiC. In contrast, the presence of kaiB in the complex decreases the phosphorylation status of kaiC, suggesting that kaiB acts by antagonizing the interaction between kaiA and kaiC. A kaiA dimer is sufficient to enhance kaiC he [...] | Proline-rich region. | 0.752 |
| kaiA | sync_1538 | sync_2222 | sync_1538 | Circadian clock protein KaiA; Component of the kaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria. The kaiABC complex may act as a promoter-nonspecific transcription regulator that represses transcription, possibly by acting on the state of chromosome compaction. In the complex, it enhances the phosphorylation status of kaiC. In contrast, the presence of kaiB in the complex decreases the phosphorylation status of kaiC, suggesting that kaiB acts by antagonizing the interaction between kaiA and kaiC. A kaiA dimer is sufficient to enhance kaiC he [...] | Predicted HTH of cAMP family transcriptional regulator, putative; Identified by match to protein family HMM PF00325. | 0.516 |
| kaiA | sync_1805 | sync_2222 | sync_1805 | Circadian clock protein KaiA; Component of the kaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria. The kaiABC complex may act as a promoter-nonspecific transcription regulator that represses transcription, possibly by acting on the state of chromosome compaction. In the complex, it enhances the phosphorylation status of kaiC. In contrast, the presence of kaiB in the complex decreases the phosphorylation status of kaiC, suggesting that kaiB acts by antagonizing the interaction between kaiA and kaiC. A kaiA dimer is sufficient to enhance kaiC he [...] | Conserved hypothetical protein. | 0.684 |
| kaiA | sync_1938 | sync_2222 | sync_1938 | Circadian clock protein KaiA; Component of the kaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria. The kaiABC complex may act as a promoter-nonspecific transcription regulator that represses transcription, possibly by acting on the state of chromosome compaction. In the complex, it enhances the phosphorylation status of kaiC. In contrast, the presence of kaiB in the complex decreases the phosphorylation status of kaiC, suggesting that kaiB acts by antagonizing the interaction between kaiA and kaiC. A kaiA dimer is sufficient to enhance kaiC he [...] | Esterase. | 0.549 |
| kaiA | sync_2084 | sync_2222 | sync_2084 | Circadian clock protein KaiA; Component of the kaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria. The kaiABC complex may act as a promoter-nonspecific transcription regulator that represses transcription, possibly by acting on the state of chromosome compaction. In the complex, it enhances the phosphorylation status of kaiC. In contrast, the presence of kaiB in the complex decreases the phosphorylation status of kaiC, suggesting that kaiB acts by antagonizing the interaction between kaiA and kaiC. A kaiA dimer is sufficient to enhance kaiC he [...] | Conserved hypothetical protein. | 0.691 |
| sync_0392 | kaiA | sync_0392 | sync_2222 | Proline-rich region. | Circadian clock protein KaiA; Component of the kaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria. The kaiABC complex may act as a promoter-nonspecific transcription regulator that represses transcription, possibly by acting on the state of chromosome compaction. In the complex, it enhances the phosphorylation status of kaiC. In contrast, the presence of kaiB in the complex decreases the phosphorylation status of kaiC, suggesting that kaiB acts by antagonizing the interaction between kaiA and kaiC. A kaiA dimer is sufficient to enhance kaiC he [...] | 0.752 |
| sync_0392 | sync_1803 | sync_0392 | sync_1803 | Proline-rich region. | Carotenoid binding protein; Identified by match to protein family HMM PF02136; Belongs to the orange carotenoid-binding protein family. | 0.734 |
| sync_0392 | sync_1805 | sync_0392 | sync_1805 | Proline-rich region. | Conserved hypothetical protein. | 0.668 |
| sync_0392 | sync_1938 | sync_0392 | sync_1938 | Proline-rich region. | Esterase. | 0.749 |
| sync_0392 | sync_2084 | sync_0392 | sync_2084 | Proline-rich region. | Conserved hypothetical protein. | 0.767 |
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