sync_1820 protein (Synechococcus sp. CC9311)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

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co-expression

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gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

sync_1820

Conserved hypothetical protein. (398 aa)

Predicted Functional Partners:

sync_1931

0.920

sync_0096

0.906

gshB

0.906

sync_1035

0.900

sync_1161

0.900

sync_1172

0.900

sync_2560

0.900

sync_1819

0.773

sync_0156

0.702

sync_0526

0.615

Your Current Organism:

Synechococcus sp. CC9311

NCBI taxonomy Id: 64471
Other names: S. sp. CC9311

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... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
gshB	sync_0096	sync_2657	sync_0096	Glutathione synthase; Identified by match to protein family HMM PF02951; match to protein family HMM PF02955; match to protein family HMM TIGR01380; Belongs to the prokaryotic GSH synthase family.	Glutathione peroxidase; Identified by match to protein family HMM PF00255; Belongs to the glutathione peroxidase family.	0.931
gshB	sync_0156	sync_2657	sync_0156	Glutathione synthase; Identified by match to protein family HMM PF02951; match to protein family HMM PF02955; match to protein family HMM TIGR01380; Belongs to the prokaryotic GSH synthase family.	Polyketide synthase, putative; Identified by match to protein family HMM PF00106; match to protein family HMM PF00107; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02801; match to protein family HMM PF07993; match to protein family HMM TIGR01746.	0.457
gshB	sync_1035	sync_2657	sync_1035	Glutathione synthase; Identified by match to protein family HMM PF02951; match to protein family HMM PF02955; match to protein family HMM TIGR01380; Belongs to the prokaryotic GSH synthase family.	Glutathione S-transferase domain protein; Identified by match to protein family HMM PF02798; match to protein family HMM PF06108.	0.909
gshB	sync_1161	sync_2657	sync_1161	Glutathione synthase; Identified by match to protein family HMM PF02951; match to protein family HMM PF02955; match to protein family HMM TIGR01380; Belongs to the prokaryotic GSH synthase family.	Glutathione S-transferase; Identified by match to protein family HMM PF02798.	0.927
gshB	sync_1172	sync_2657	sync_1172	Glutathione synthase; Identified by match to protein family HMM PF02951; match to protein family HMM PF02955; match to protein family HMM TIGR01380; Belongs to the prokaryotic GSH synthase family.	Glutathione S-transferase gst; Identified by match to protein family HMM PF02798.	0.928
gshB	sync_1820	sync_2657	sync_1820	Glutathione synthase; Identified by match to protein family HMM PF02951; match to protein family HMM PF02955; match to protein family HMM TIGR01380; Belongs to the prokaryotic GSH synthase family.	Conserved hypothetical protein.	0.906
gshB	sync_1931	sync_2657	sync_1931	Glutathione synthase; Identified by match to protein family HMM PF02951; match to protein family HMM PF02955; match to protein family HMM TIGR01380; Belongs to the prokaryotic GSH synthase family.	Glutathione reductase; Identified by match to protein family HMM PF00070; match to protein family HMM PF02852; match to protein family HMM PF07992.	0.957
gshB	sync_2560	sync_2657	sync_2560	Glutathione synthase; Identified by match to protein family HMM PF02951; match to protein family HMM PF02955; match to protein family HMM TIGR01380; Belongs to the prokaryotic GSH synthase family.	Glutathione S-transferase zeta class.	0.921
sync_0096	gshB	sync_0096	sync_2657	Glutathione peroxidase; Identified by match to protein family HMM PF00255; Belongs to the glutathione peroxidase family.	Glutathione synthase; Identified by match to protein family HMM PF02951; match to protein family HMM PF02955; match to protein family HMM TIGR01380; Belongs to the prokaryotic GSH synthase family.	0.931
sync_0096	sync_0156	sync_0096	sync_0156	Glutathione peroxidase; Identified by match to protein family HMM PF00255; Belongs to the glutathione peroxidase family.	Polyketide synthase, putative; Identified by match to protein family HMM PF00106; match to protein family HMM PF00107; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02801; match to protein family HMM PF07993; match to protein family HMM TIGR01746.	0.638
sync_0096	sync_1035	sync_0096	sync_1035	Glutathione peroxidase; Identified by match to protein family HMM PF00255; Belongs to the glutathione peroxidase family.	Glutathione S-transferase domain protein; Identified by match to protein family HMM PF02798; match to protein family HMM PF06108.	0.906
sync_0096	sync_1161	sync_0096	sync_1161	Glutathione peroxidase; Identified by match to protein family HMM PF00255; Belongs to the glutathione peroxidase family.	Glutathione S-transferase; Identified by match to protein family HMM PF02798.	0.906
sync_0096	sync_1172	sync_0096	sync_1172	Glutathione peroxidase; Identified by match to protein family HMM PF00255; Belongs to the glutathione peroxidase family.	Glutathione S-transferase gst; Identified by match to protein family HMM PF02798.	0.906
sync_0096	sync_1820	sync_0096	sync_1820	Glutathione peroxidase; Identified by match to protein family HMM PF00255; Belongs to the glutathione peroxidase family.	Conserved hypothetical protein.	0.906
sync_0096	sync_1931	sync_0096	sync_1931	Glutathione peroxidase; Identified by match to protein family HMM PF00255; Belongs to the glutathione peroxidase family.	Glutathione reductase; Identified by match to protein family HMM PF00070; match to protein family HMM PF02852; match to protein family HMM PF07992.	0.917
sync_0096	sync_2560	sync_0096	sync_2560	Glutathione peroxidase; Identified by match to protein family HMM PF00255; Belongs to the glutathione peroxidase family.	Glutathione S-transferase zeta class.	0.906
sync_0156	gshB	sync_0156	sync_2657	Polyketide synthase, putative; Identified by match to protein family HMM PF00106; match to protein family HMM PF00107; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02801; match to protein family HMM PF07993; match to protein family HMM TIGR01746.	Glutathione synthase; Identified by match to protein family HMM PF02951; match to protein family HMM PF02955; match to protein family HMM TIGR01380; Belongs to the prokaryotic GSH synthase family.	0.457
sync_0156	sync_0096	sync_0156	sync_0096	Polyketide synthase, putative; Identified by match to protein family HMM PF00106; match to protein family HMM PF00107; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02801; match to protein family HMM PF07993; match to protein family HMM TIGR01746.	Glutathione peroxidase; Identified by match to protein family HMM PF00255; Belongs to the glutathione peroxidase family.	0.638
sync_0156	sync_1035	sync_0156	sync_1035	Polyketide synthase, putative; Identified by match to protein family HMM PF00106; match to protein family HMM PF00107; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02801; match to protein family HMM PF07993; match to protein family HMM TIGR01746.	Glutathione S-transferase domain protein; Identified by match to protein family HMM PF02798; match to protein family HMM PF06108.	0.702
sync_0156	sync_1161	sync_0156	sync_1161	Polyketide synthase, putative; Identified by match to protein family HMM PF00106; match to protein family HMM PF00107; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02801; match to protein family HMM PF07993; match to protein family HMM TIGR01746.	Glutathione S-transferase; Identified by match to protein family HMM PF02798.	0.702