STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
sync_1823Conserved hypothetical protein; Identified by similarity to GB:CAE21610.1. (109 aa)    
Predicted Functional Partners:
sync_1876
Lipase family protein.
  
     0.746
sync_1718
Conserved hypothetical protein.
  
     0.743
sync_2916
Identified by match to protein family HMM PF04932.
  
     0.708
sync_2646
Unnamed protein product.
  
     0.692
sync_1632
Conserved hypothetical protein.
  
     0.646
sync_0469
Conserved hypothetical protein; Identified by similarity to GB:CAE21879.1.
  
     0.642
sync_2232
Conserved hypothetical protein; Identified by similarity to GB:CAE07060.1.
  
     0.636
sync_0794
Uncharacterized membrane protein.
  
     0.618
sync_2257
Uncharacterized conserved membrane protein.
  
     0.612
sync_2174
MAPEG family protein.
  
     0.609
Your Current Organism:
Synechococcus sp. CC9311
NCBI taxonomy Id: 64471
Other names: S. sp. CC9311
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.