STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sync_1825Uncharacterized protein. (231 aa)    
Predicted Functional Partners:
sync_1824
Pyridoxamine 5'-phosphate oxidase family protein; Identified by match to protein family HMM PF01243.
 
     0.804
petG
Cytochrome b6-f complex, subunit V; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions. PetG is required for either the stability or assembly of the cytochrome b6-f complex.
  
     0.743
sync_1523
Uncharacterized protein.
  
     0.711
psaJ
Photosystem I reaction centre subunit IX-related protein; May help in the organization of the PsaE and PsaF subunits. Belongs to the PsaJ family.
  
     0.631
sync_2723
Conserved hypothetical protein.
  
     0.617
sync_0805
Zeta-carotene desaturase.
  
     0.612
sync_2471
Conserved hypothetical protein.
  
     0.610
sync_1831
Cell death suppressor protein Lls1 homolog; Identified by match to protein family HMM PF00355.
  
     0.605
hli-4
Lhc-like protein Lhl4.
  
     0.584
hli-2
Lhc-like protein Lhl4.
  
     0.581
Your Current Organism:
Synechococcus sp. CC9311
NCBI taxonomy Id: 64471
Other names: S. sp. CC9311
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.