Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| kaiA | sync_0290 | sync_2222 | sync_0290 | Circadian clock protein KaiA; Component of the kaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria. The kaiABC complex may act as a promoter-nonspecific transcription regulator that represses transcription, possibly by acting on the state of chromosome compaction. In the complex, it enhances the phosphorylation status of kaiC. In contrast, the presence of kaiB in the complex decreases the phosphorylation status of kaiC, suggesting that kaiB acts by antagonizing the interaction between kaiA and kaiC. A kaiA dimer is sufficient to enhance kaiC he [...] | Conserved hypothetical protein. | 0.692 |
| kaiA | sync_1825 | sync_2222 | sync_1825 | Circadian clock protein KaiA; Component of the kaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria. The kaiABC complex may act as a promoter-nonspecific transcription regulator that represses transcription, possibly by acting on the state of chromosome compaction. In the complex, it enhances the phosphorylation status of kaiC. In contrast, the presence of kaiB in the complex decreases the phosphorylation status of kaiC, suggesting that kaiB acts by antagonizing the interaction between kaiA and kaiC. A kaiA dimer is sufficient to enhance kaiC he [...] | Uncharacterized protein. | 0.491 |
| kaiA | sync_1831 | sync_2222 | sync_1831 | Circadian clock protein KaiA; Component of the kaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria. The kaiABC complex may act as a promoter-nonspecific transcription regulator that represses transcription, possibly by acting on the state of chromosome compaction. In the complex, it enhances the phosphorylation status of kaiC. In contrast, the presence of kaiB in the complex decreases the phosphorylation status of kaiC, suggesting that kaiB acts by antagonizing the interaction between kaiA and kaiC. A kaiA dimer is sufficient to enhance kaiC he [...] | Cell death suppressor protein Lls1 homolog; Identified by match to protein family HMM PF00355. | 0.511 |
| kaiA | sync_2206 | sync_2222 | sync_2206 | Circadian clock protein KaiA; Component of the kaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria. The kaiABC complex may act as a promoter-nonspecific transcription regulator that represses transcription, possibly by acting on the state of chromosome compaction. In the complex, it enhances the phosphorylation status of kaiC. In contrast, the presence of kaiB in the complex decreases the phosphorylation status of kaiC, suggesting that kaiB acts by antagonizing the interaction between kaiA and kaiC. A kaiA dimer is sufficient to enhance kaiC he [...] | Conserved hypothetical protein. | 0.403 |
| kaiA | sync_2484 | sync_2222 | sync_2484 | Circadian clock protein KaiA; Component of the kaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria. The kaiABC complex may act as a promoter-nonspecific transcription regulator that represses transcription, possibly by acting on the state of chromosome compaction. In the complex, it enhances the phosphorylation status of kaiC. In contrast, the presence of kaiB in the complex decreases the phosphorylation status of kaiC, suggesting that kaiB acts by antagonizing the interaction between kaiA and kaiC. A kaiA dimer is sufficient to enhance kaiC he [...] | Ferredoxin thioredoxin reductase, catalytic beta chain; Catalytic subunit of the ferredoxin-thioredoxin reductase (FTR), which catalyzes the two-electron reduction of thioredoxins by the electrons provided by reduced ferredoxin. | 0.462 |
| sync_0290 | kaiA | sync_0290 | sync_2222 | Conserved hypothetical protein. | Circadian clock protein KaiA; Component of the kaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria. The kaiABC complex may act as a promoter-nonspecific transcription regulator that represses transcription, possibly by acting on the state of chromosome compaction. In the complex, it enhances the phosphorylation status of kaiC. In contrast, the presence of kaiB in the complex decreases the phosphorylation status of kaiC, suggesting that kaiB acts by antagonizing the interaction between kaiA and kaiC. A kaiA dimer is sufficient to enhance kaiC he [...] | 0.692 |
| sync_0290 | sync_1831 | sync_0290 | sync_1831 | Conserved hypothetical protein. | Cell death suppressor protein Lls1 homolog; Identified by match to protein family HMM PF00355. | 0.595 |
| sync_0290 | sync_2206 | sync_0290 | sync_2206 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.493 |
| sync_0290 | sync_2484 | sync_0290 | sync_2484 | Conserved hypothetical protein. | Ferredoxin thioredoxin reductase, catalytic beta chain; Catalytic subunit of the ferredoxin-thioredoxin reductase (FTR), which catalyzes the two-electron reduction of thioredoxins by the electrons provided by reduced ferredoxin. | 0.771 |
| sync_1523 | sync_1825 | sync_1523 | sync_1825 | Uncharacterized protein. | Uncharacterized protein. | 0.711 |
| sync_1523 | sync_1831 | sync_1523 | sync_1831 | Uncharacterized protein. | Cell death suppressor protein Lls1 homolog; Identified by match to protein family HMM PF00355. | 0.578 |
| sync_1523 | sync_2206 | sync_1523 | sync_2206 | Uncharacterized protein. | Conserved hypothetical protein. | 0.464 |
| sync_1523 | sync_2634 | sync_1523 | sync_2634 | Uncharacterized protein. | Conserved hypothetical protein. | 0.537 |
| sync_1825 | kaiA | sync_1825 | sync_2222 | Uncharacterized protein. | Circadian clock protein KaiA; Component of the kaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria. The kaiABC complex may act as a promoter-nonspecific transcription regulator that represses transcription, possibly by acting on the state of chromosome compaction. In the complex, it enhances the phosphorylation status of kaiC. In contrast, the presence of kaiB in the complex decreases the phosphorylation status of kaiC, suggesting that kaiB acts by antagonizing the interaction between kaiA and kaiC. A kaiA dimer is sufficient to enhance kaiC he [...] | 0.491 |
| sync_1825 | sync_1523 | sync_1825 | sync_1523 | Uncharacterized protein. | Uncharacterized protein. | 0.711 |
| sync_1825 | sync_1831 | sync_1825 | sync_1831 | Uncharacterized protein. | Cell death suppressor protein Lls1 homolog; Identified by match to protein family HMM PF00355. | 0.605 |
| sync_1830 | sync_1831 | sync_1830 | sync_1831 | Predicted enzyme of the cupin superfamily protein; Identified by match to protein family HMM PF05899. | Cell death suppressor protein Lls1 homolog; Identified by match to protein family HMM PF00355. | 0.773 |
| sync_1830 | sync_1832 | sync_1830 | sync_1832 | Predicted enzyme of the cupin superfamily protein; Identified by match to protein family HMM PF05899. | Protein of unknown function (DUF1499) superfamily protein; Identified by match to protein family HMM PF07386. | 0.480 |
| sync_1831 | kaiA | sync_1831 | sync_2222 | Cell death suppressor protein Lls1 homolog; Identified by match to protein family HMM PF00355. | Circadian clock protein KaiA; Component of the kaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria. The kaiABC complex may act as a promoter-nonspecific transcription regulator that represses transcription, possibly by acting on the state of chromosome compaction. In the complex, it enhances the phosphorylation status of kaiC. In contrast, the presence of kaiB in the complex decreases the phosphorylation status of kaiC, suggesting that kaiB acts by antagonizing the interaction between kaiA and kaiC. A kaiA dimer is sufficient to enhance kaiC he [...] | 0.511 |
| sync_1831 | sync_0290 | sync_1831 | sync_0290 | Cell death suppressor protein Lls1 homolog; Identified by match to protein family HMM PF00355. | Conserved hypothetical protein. | 0.595 |
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