Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
nth | sync_1851 | sync_1850 | sync_1851 | Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. | Putative high light inducible protein. | 0.594 |
nth | sync_1852 | sync_1850 | sync_1852 | Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. | Conserved hypothetical protein; Identified by similarity to GB:CAE21734.1. | 0.459 |
sync_1851 | nth | sync_1851 | sync_1850 | Putative high light inducible protein. | Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. | 0.594 |
sync_1851 | sync_1852 | sync_1851 | sync_1852 | Putative high light inducible protein. | Conserved hypothetical protein; Identified by similarity to GB:CAE21734.1. | 0.586 |
sync_1851 | sync_1853 | sync_1851 | sync_1853 | Putative high light inducible protein. | Conserved hypothetical protein; Identified by similarity to GB:CAE21451.1. | 0.431 |
sync_1851 | sync_1854 | sync_1851 | sync_1854 | Putative high light inducible protein. | Possible pfkB family carbohydrate kinase; Identified by match to protein family HMM PF00294. | 0.431 |
sync_1852 | nth | sync_1852 | sync_1850 | Conserved hypothetical protein; Identified by similarity to GB:CAE21734.1. | Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. | 0.459 |
sync_1852 | sync_1851 | sync_1852 | sync_1851 | Conserved hypothetical protein; Identified by similarity to GB:CAE21734.1. | Putative high light inducible protein. | 0.586 |
sync_1852 | sync_1853 | sync_1852 | sync_1853 | Conserved hypothetical protein; Identified by similarity to GB:CAE21734.1. | Conserved hypothetical protein; Identified by similarity to GB:CAE21451.1. | 0.554 |
sync_1852 | sync_1854 | sync_1852 | sync_1854 | Conserved hypothetical protein; Identified by similarity to GB:CAE21734.1. | Possible pfkB family carbohydrate kinase; Identified by match to protein family HMM PF00294. | 0.554 |
sync_1853 | sync_1851 | sync_1853 | sync_1851 | Conserved hypothetical protein; Identified by similarity to GB:CAE21451.1. | Putative high light inducible protein. | 0.431 |
sync_1853 | sync_1852 | sync_1853 | sync_1852 | Conserved hypothetical protein; Identified by similarity to GB:CAE21451.1. | Conserved hypothetical protein; Identified by similarity to GB:CAE21734.1. | 0.554 |
sync_1853 | sync_1854 | sync_1853 | sync_1854 | Conserved hypothetical protein; Identified by similarity to GB:CAE21451.1. | Possible pfkB family carbohydrate kinase; Identified by match to protein family HMM PF00294. | 0.773 |
sync_1854 | sync_1851 | sync_1854 | sync_1851 | Possible pfkB family carbohydrate kinase; Identified by match to protein family HMM PF00294. | Putative high light inducible protein. | 0.431 |
sync_1854 | sync_1852 | sync_1854 | sync_1852 | Possible pfkB family carbohydrate kinase; Identified by match to protein family HMM PF00294. | Conserved hypothetical protein; Identified by similarity to GB:CAE21734.1. | 0.554 |
sync_1854 | sync_1853 | sync_1854 | sync_1853 | Possible pfkB family carbohydrate kinase; Identified by match to protein family HMM PF00294. | Conserved hypothetical protein; Identified by similarity to GB:CAE21451.1. | 0.773 |