sync_1875 protein (Synechococcus sp. CC9311)

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

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Cooccurrence

Coexpression

Experiments

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[Homology]

Score

sync_1875

Putative membrane protein. (231 aa)

Predicted Functional Partners:

sync_1874

0.655

sync_1876

0.598

sync_1857

0.536

sync_1019

0.519

sync_1880

0.517

sync_1916

0.442

sync_1433

0.433

sync_2717

0.428

sync_2811

0.427

sync_0591

0.403

Your Current Organism:

Synechococcus sp. CC9311

NCBI taxonomy Id: 64471
Other names: S. sp. CC9311

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
sync_0591	sync_1019	Membrane protein, putative.	Conserved hypothetical protein; Identified by similarity to GB:CAE07461.1.	0.746
sync_0591	sync_1433	Membrane protein, putative.	Possible endolysin.	0.527
sync_0591	sync_1857	Membrane protein, putative.	Identified by match to protein family HMM PF00149; match to protein family HMM TIGR01409.	0.530
sync_0591	sync_1875	Membrane protein, putative.	Putative membrane protein.	0.403
sync_0591	sync_1880	Membrane protein, putative.	Uncharacterized conserved protein; Identified by match to protein family HMM PF04357.	0.612
sync_0591	sync_1916	Membrane protein, putative.	Hypothetical conserved protein; Identified by match to protein family HMM PF07681.	0.607
sync_0591	sync_2717	Membrane protein, putative.	Possible general (type II) secretion pathway protein D precursor; Identified by match to protein family HMM PF00263; match to protein family HMM PF07660; Belongs to the bacterial secretin family.	0.429
sync_0591	sync_2811	Membrane protein, putative.	Hypothetical protein; Identified by Glimmer2; putative.	0.556
sync_1019	sync_0591	Conserved hypothetical protein; Identified by similarity to GB:CAE07461.1.	Membrane protein, putative.	0.746
sync_1019	sync_1433	Conserved hypothetical protein; Identified by similarity to GB:CAE07461.1.	Possible endolysin.	0.733
sync_1019	sync_1875	Conserved hypothetical protein; Identified by similarity to GB:CAE07461.1.	Putative membrane protein.	0.519
sync_1019	sync_1880	Conserved hypothetical protein; Identified by similarity to GB:CAE07461.1.	Uncharacterized conserved protein; Identified by match to protein family HMM PF04357.	0.754
sync_1019	sync_1916	Conserved hypothetical protein; Identified by similarity to GB:CAE07461.1.	Hypothetical conserved protein; Identified by match to protein family HMM PF07681.	0.710
sync_1019	sync_2717	Conserved hypothetical protein; Identified by similarity to GB:CAE07461.1.	Possible general (type II) secretion pathway protein D precursor; Identified by match to protein family HMM PF00263; match to protein family HMM PF07660; Belongs to the bacterial secretin family.	0.725
sync_1019	sync_2811	Conserved hypothetical protein; Identified by similarity to GB:CAE07461.1.	Hypothetical protein; Identified by Glimmer2; putative.	0.750
sync_1433	sync_0591	Possible endolysin.	Membrane protein, putative.	0.527
sync_1433	sync_1019	Possible endolysin.	Conserved hypothetical protein; Identified by similarity to GB:CAE07461.1.	0.733
sync_1433	sync_1875	Possible endolysin.	Putative membrane protein.	0.433
sync_1433	sync_1880	Possible endolysin.	Uncharacterized conserved protein; Identified by match to protein family HMM PF04357.	0.691
sync_1433	sync_1916	Possible endolysin.	Hypothetical conserved protein; Identified by match to protein family HMM PF07681.	0.737