STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sync_1876Lipase family protein. (120 aa)    
Predicted Functional Partners:
dgkA
Diacylglycerol kinase; Identified by match to protein family HMM PF01219.
     
 0.904
sync_0061
Glycosyl transferase, group 2 family protein; Identified by match to protein family HMM PF00535.
   
 
  0.900
sync_0157
Conserved hypothetical protein.
     
  0.900
fadD-1
Long-chain acyl-CoA synthetase; Identified by match to protein family HMM PF00501.
   
 
 0.827
fcs
feruloyl-CoA synthetase; Identified by similarity to GB:CAC18323.1; match to protein family HMM PF00501; match to protein family HMM TIGR01923.
     
 0.800
fadD-2
long-chain-fatty-acid-CoA ligase.
     
 0.800
sync_1823
Conserved hypothetical protein; Identified by similarity to GB:CAE21610.1.
  
     0.746
sync_2916
Identified by match to protein family HMM PF04932.
  
     0.660
sync_1667
Arylesterase.
  
   
 0.618
sync_0794
Uncharacterized membrane protein.
  
     0.613
Your Current Organism:
Synechococcus sp. CC9311
NCBI taxonomy Id: 64471
Other names: S. sp. CC9311
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