Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
sync_1883Conserved hypothetical protein; Identified by similarity to GB:CAE20616.1. (90 aa)    
Predicted Functional Partners:
sync_1884
X-Pro dipeptidyl-peptidase (S15 family); Identified by match to protein family HMM PF02129; match to protein family HMM TIGR00976.
       0.673
sync_1881
Conserved hypothetical protein.
       0.589
sync_1882
Uncharacterized conserved protein.
       0.520
sync_1885
Conserved hypothetical protein.
       0.515
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
       0.489
sync_1880
Uncharacterized conserved protein; Identified by match to protein family HMM PF04357.
       0.471
hemE
Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III.
       0.410
wcaG-4
NAD dependent epimerase/dehydratase; Identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF07993.
       0.409
sync_1879
ROK family sugar kinase; Identified by match to protein family HMM PF00480.
       0.405
Your Current Organism:
Synechococcus sp. CC9311
NCBI taxonomy Id: 64471
Other names: S. sp. CC9311
Server load: medium (60%) [HD]