STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sync_1926Conserved hypothetical protein. (206 aa)    
Predicted Functional Partners:
sync_1925
Conserved hypothetical protein.
 
     0.952
sync_1930
Dehydrogenase subunit-like protein; Identified by match to protein family HMM PF05199.
 
     0.830
sync_1927
Possible cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
 
   
 0.812
sync_1929
Cytochrome c oxidase subunit III.
 
   
 0.760
sync_0499
Bilin biosynthesis protein cpeY.
  
     0.726
sync_1142
Conserved hypothetical protein.
  
     0.719
sync_0345
Uncharacterized secreted or membrane protein.
  
     0.713
sync_1928
Cytochrome c oxidase subunit I; Identified by match to protein family HMM PF00115; Belongs to the heme-copper respiratory oxidase family.
     
 0.708
sync_1040
Conserved hypothetical protein.
  
     0.707
sync_2176
Uncharacterized protein.
  
     0.694
Your Current Organism:
Synechococcus sp. CC9311
NCBI taxonomy Id: 64471
Other names: S. sp. CC9311
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.