Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
sodX | sync_1952 | sync_0754 | sync_1952 | Nickel-type superoxide dismutase maturation protease; Identified by match to protein family HMM PF00717; match to protein family HMM TIGR02754. | Conserved hypothetical protein. | 0.593 |
sync_0156 | sync_1473 | sync_0156 | sync_1473 | Polyketide synthase, putative; Identified by match to protein family HMM PF00106; match to protein family HMM PF00107; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02801; match to protein family HMM PF07993; match to protein family HMM TIGR01746. | Predicted calcineurin family phosphoesterase. | 0.445 |
sync_0156 | sync_1951 | sync_0156 | sync_1951 | Polyketide synthase, putative; Identified by match to protein family HMM PF00106; match to protein family HMM PF00107; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02801; match to protein family HMM PF07993; match to protein family HMM TIGR01746. | Thioredoxin reductase; Identified by match to protein family HMM PF03486; match to protein family HMM PF07992. | 0.492 |
sync_0156 | sync_1952 | sync_0156 | sync_1952 | Polyketide synthase, putative; Identified by match to protein family HMM PF00106; match to protein family HMM PF00107; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02801; match to protein family HMM PF07993; match to protein family HMM TIGR01746. | Conserved hypothetical protein. | 0.949 |
sync_0156 | sync_2860 | sync_0156 | sync_2860 | Polyketide synthase, putative; Identified by match to protein family HMM PF00106; match to protein family HMM PF00107; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02801; match to protein family HMM PF07993; match to protein family HMM TIGR01746. | Conserved hypothetical protein. | 0.589 |
sync_0392 | sync_0563 | sync_0392 | sync_0563 | Proline-rich region. | Uncharacterized protein. | 0.774 |
sync_0392 | sync_1473 | sync_0392 | sync_1473 | Proline-rich region. | Predicted calcineurin family phosphoesterase. | 0.442 |
sync_0392 | sync_1865 | sync_0392 | sync_1865 | Proline-rich region. | Conserved hypothetical protein. | 0.772 |
sync_0392 | sync_1952 | sync_0392 | sync_1952 | Proline-rich region. | Conserved hypothetical protein. | 0.623 |
sync_0392 | sync_2860 | sync_0392 | sync_2860 | Proline-rich region. | Conserved hypothetical protein. | 0.771 |
sync_0563 | sync_0392 | sync_0563 | sync_0392 | Uncharacterized protein. | Proline-rich region. | 0.774 |
sync_0563 | sync_1473 | sync_0563 | sync_1473 | Uncharacterized protein. | Predicted calcineurin family phosphoesterase. | 0.471 |
sync_0563 | sync_1865 | sync_0563 | sync_1865 | Uncharacterized protein. | Conserved hypothetical protein. | 0.773 |
sync_0563 | sync_1952 | sync_0563 | sync_1952 | Uncharacterized protein. | Conserved hypothetical protein. | 0.657 |
sync_0563 | sync_2860 | sync_0563 | sync_2860 | Uncharacterized protein. | Conserved hypothetical protein. | 0.747 |
sync_1297 | sync_1952 | sync_1297 | sync_1952 | Hypothetical protein; Identified by Glimmer2; putative. | Conserved hypothetical protein. | 0.599 |
sync_1334 | sync_1952 | sync_1334 | sync_1952 | Mo-dependent nitrogenase C-terminus family protein; Identified by match to protein family HMM PF06967. | Conserved hypothetical protein. | 0.679 |
sync_1334 | sync_2860 | sync_1334 | sync_2860 | Mo-dependent nitrogenase C-terminus family protein; Identified by match to protein family HMM PF06967. | Conserved hypothetical protein. | 0.591 |
sync_1473 | sync_0156 | sync_1473 | sync_0156 | Predicted calcineurin family phosphoesterase. | Polyketide synthase, putative; Identified by match to protein family HMM PF00106; match to protein family HMM PF00107; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02801; match to protein family HMM PF07993; match to protein family HMM TIGR01746. | 0.445 |
sync_1473 | sync_0392 | sync_1473 | sync_0392 | Predicted calcineurin family phosphoesterase. | Proline-rich region. | 0.442 |
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