sync_1960 protein (Synechococcus sp. CC9311)

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Score

sync_1960

Possible carbon dioxide concentrating mechanism protein CcmK; Identified by match to protein family HMM PF00936. (143 aa)

Predicted Functional Partners:

sync_1963

0.843

sync_1962

0.824

sync_1970

0.796

sync_1957

0.600

sync_1959

0.596

sync_1958

0.586

sync_1961

0.566

sync_1965

0.409

Your Current Organism:

Synechococcus sp. CC9311

NCBI taxonomy Id: 64471
Other names: S. sp. CC9311

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
sync_1957	sync_1958	CO2 hydration protein; Identified by match to protein family HMM TIGR01964.	NADH-ubiquinone/plastoquinone oxidoreductase, subunit 4 family protein; Identified by match to protein family HMM PF00361; match to protein family HMM TIGR01972.	0.994
sync_1957	sync_1959	CO2 hydration protein; Identified by match to protein family HMM TIGR01964.	NAD(P)H dehydrogenase, subunit NdhF3 family protein; Identified by match to protein family HMM PF00361; match to protein family HMM TIGR01960.	0.997
sync_1957	sync_1960	CO2 hydration protein; Identified by match to protein family HMM TIGR01964.	Possible carbon dioxide concentrating mechanism protein CcmK; Identified by match to protein family HMM PF00936.	0.600
sync_1957	sync_1961	CO2 hydration protein; Identified by match to protein family HMM TIGR01964.	Hypothetical protein; Identified by Glimmer2; putative.	0.420
sync_1958	sync_1957	NADH-ubiquinone/plastoquinone oxidoreductase, subunit 4 family protein; Identified by match to protein family HMM PF00361; match to protein family HMM TIGR01972.	CO2 hydration protein; Identified by match to protein family HMM TIGR01964.	0.994
sync_1958	sync_1959	NADH-ubiquinone/plastoquinone oxidoreductase, subunit 4 family protein; Identified by match to protein family HMM PF00361; match to protein family HMM TIGR01972.	NAD(P)H dehydrogenase, subunit NdhF3 family protein; Identified by match to protein family HMM PF00361; match to protein family HMM TIGR01960.	0.998
sync_1958	sync_1960	NADH-ubiquinone/plastoquinone oxidoreductase, subunit 4 family protein; Identified by match to protein family HMM PF00361; match to protein family HMM TIGR01972.	Possible carbon dioxide concentrating mechanism protein CcmK; Identified by match to protein family HMM PF00936.	0.586
sync_1958	sync_1961	NADH-ubiquinone/plastoquinone oxidoreductase, subunit 4 family protein; Identified by match to protein family HMM PF00361; match to protein family HMM TIGR01972.	Hypothetical protein; Identified by Glimmer2; putative.	0.420
sync_1959	sync_1957	NAD(P)H dehydrogenase, subunit NdhF3 family protein; Identified by match to protein family HMM PF00361; match to protein family HMM TIGR01960.	CO2 hydration protein; Identified by match to protein family HMM TIGR01964.	0.997
sync_1959	sync_1958	NAD(P)H dehydrogenase, subunit NdhF3 family protein; Identified by match to protein family HMM PF00361; match to protein family HMM TIGR01960.	NADH-ubiquinone/plastoquinone oxidoreductase, subunit 4 family protein; Identified by match to protein family HMM PF00361; match to protein family HMM TIGR01972.	0.998
sync_1959	sync_1960	NAD(P)H dehydrogenase, subunit NdhF3 family protein; Identified by match to protein family HMM PF00361; match to protein family HMM TIGR01960.	Possible carbon dioxide concentrating mechanism protein CcmK; Identified by match to protein family HMM PF00936.	0.596
sync_1959	sync_1961	NAD(P)H dehydrogenase, subunit NdhF3 family protein; Identified by match to protein family HMM PF00361; match to protein family HMM TIGR01960.	Hypothetical protein; Identified by Glimmer2; putative.	0.420
sync_1960	sync_1957	Possible carbon dioxide concentrating mechanism protein CcmK; Identified by match to protein family HMM PF00936.	CO2 hydration protein; Identified by match to protein family HMM TIGR01964.	0.600
sync_1960	sync_1958	Possible carbon dioxide concentrating mechanism protein CcmK; Identified by match to protein family HMM PF00936.	NADH-ubiquinone/plastoquinone oxidoreductase, subunit 4 family protein; Identified by match to protein family HMM PF00361; match to protein family HMM TIGR01972.	0.586
sync_1960	sync_1959	Possible carbon dioxide concentrating mechanism protein CcmK; Identified by match to protein family HMM PF00936.	NAD(P)H dehydrogenase, subunit NdhF3 family protein; Identified by match to protein family HMM PF00361; match to protein family HMM TIGR01960.	0.596
sync_1960	sync_1961	Possible carbon dioxide concentrating mechanism protein CcmK; Identified by match to protein family HMM PF00936.	Hypothetical protein; Identified by Glimmer2; putative.	0.566
sync_1960	sync_1962	Possible carbon dioxide concentrating mechanism protein CcmK; Identified by match to protein family HMM PF00936.	Carboxysome peptide A; Identified by match to protein family HMM PF03319; match to protein family HMM TIGR02704.	0.824
sync_1960	sync_1963	Possible carbon dioxide concentrating mechanism protein CcmK; Identified by match to protein family HMM PF00936.	Carboxysome peptide A; Identified by match to protein family HMM PF03319; match to protein family HMM TIGR02703.	0.843
sync_1960	sync_1965	Possible carbon dioxide concentrating mechanism protein CcmK; Identified by match to protein family HMM PF00936.	Hypothetical protein; Identified by Glimmer2; putative.	0.409
sync_1960	sync_1970	Possible carbon dioxide concentrating mechanism protein CcmK; Identified by match to protein family HMM PF00936.	Conserved hypothetical protein; Identified by similarity to GB:CAE19006.1.	0.796