sync_1962 protein (Synechococcus sp. CC9311)

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sync_1962

Carboxysome peptide A; Identified by match to protein family HMM PF03319; match to protein family HMM TIGR02704. (83 aa)

Predicted Functional Partners:

sync_1964

0.952

sync_1965

0.952

sync_1970

0.925

cbbS

0.886

sync_1968

0.886

sync_1960

0.824

sync_1963

0.818

sync_1946

0.800

sync_0528

0.733

cbbL

0.673

Your Current Organism:

Synechococcus sp. CC9311

NCBI taxonomy Id: 64471
Other names: S. sp. CC9311

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
cbbL	cbbS	sync_1967	sync_1966	Ribulose bisphosphate carboxylase, large subunit; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate in the photorespiration process. Both reactions occur simultaneously and in competition at the same active site. Belongs to the RuBisCO large chain family. Type I subfamily.	Ribulose bisphosphate carboxylase, small subunit; Identified by match to protein family HMM PF00101.	0.999
cbbL	sync_1962	sync_1967	sync_1962	Ribulose bisphosphate carboxylase, large subunit; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate in the photorespiration process. Both reactions occur simultaneously and in competition at the same active site. Belongs to the RuBisCO large chain family. Type I subfamily.	Carboxysome peptide A; Identified by match to protein family HMM PF03319; match to protein family HMM TIGR02704.	0.673
cbbL	sync_1963	sync_1967	sync_1963	Ribulose bisphosphate carboxylase, large subunit; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate in the photorespiration process. Both reactions occur simultaneously and in competition at the same active site. Belongs to the RuBisCO large chain family. Type I subfamily.	Carboxysome peptide A; Identified by match to protein family HMM PF03319; match to protein family HMM TIGR02703.	0.662
cbbL	sync_1964	sync_1967	sync_1964	Ribulose bisphosphate carboxylase, large subunit; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate in the photorespiration process. Both reactions occur simultaneously and in competition at the same active site. Belongs to the RuBisCO large chain family. Type I subfamily.	Carboxysome shell protein CsoS3; Identified by match to protein family HMM TIGR02701.	0.719
cbbL	sync_1965	sync_1967	sync_1965	Ribulose bisphosphate carboxylase, large subunit; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate in the photorespiration process. Both reactions occur simultaneously and in competition at the same active site. Belongs to the RuBisCO large chain family. Type I subfamily.	Hypothetical protein; Identified by Glimmer2; putative.	0.728
cbbL	sync_1968	sync_1967	sync_1968	Ribulose bisphosphate carboxylase, large subunit; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate in the photorespiration process. Both reactions occur simultaneously and in competition at the same active site. Belongs to the RuBisCO large chain family. Type I subfamily.	Carbon dioxide concentrating mechanism protein ccmK; Identified by match to protein family HMM PF00936.	0.854
cbbS	cbbL	sync_1966	sync_1967	Ribulose bisphosphate carboxylase, small subunit; Identified by match to protein family HMM PF00101.	Ribulose bisphosphate carboxylase, large subunit; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate in the photorespiration process. Both reactions occur simultaneously and in competition at the same active site. Belongs to the RuBisCO large chain family. Type I subfamily.	0.999
cbbS	sync_0528	sync_1966	sync_0528	Ribulose bisphosphate carboxylase, small subunit; Identified by match to protein family HMM PF00101.	Carbohydrate kinase, FGGY family protein; Identified by match to protein family HMM PF00370.	0.579
cbbS	sync_1946	sync_1966	sync_1946	Ribulose bisphosphate carboxylase, small subunit; Identified by match to protein family HMM PF00101.	Possible pterin-4 alpha-carbinolamine dehydratase-like protein.	0.685
cbbS	sync_1962	sync_1966	sync_1962	Ribulose bisphosphate carboxylase, small subunit; Identified by match to protein family HMM PF00101.	Carboxysome peptide A; Identified by match to protein family HMM PF03319; match to protein family HMM TIGR02704.	0.886
cbbS	sync_1963	sync_1966	sync_1963	Ribulose bisphosphate carboxylase, small subunit; Identified by match to protein family HMM PF00101.	Carboxysome peptide A; Identified by match to protein family HMM PF03319; match to protein family HMM TIGR02703.	0.882
cbbS	sync_1964	sync_1966	sync_1964	Ribulose bisphosphate carboxylase, small subunit; Identified by match to protein family HMM PF00101.	Carboxysome shell protein CsoS3; Identified by match to protein family HMM TIGR02701.	0.888
cbbS	sync_1965	sync_1966	sync_1965	Ribulose bisphosphate carboxylase, small subunit; Identified by match to protein family HMM PF00101.	Hypothetical protein; Identified by Glimmer2; putative.	0.878
cbbS	sync_1968	sync_1966	sync_1968	Ribulose bisphosphate carboxylase, small subunit; Identified by match to protein family HMM PF00101.	Carbon dioxide concentrating mechanism protein ccmK; Identified by match to protein family HMM PF00936.	0.806
cbbS	sync_1970	sync_1966	sync_1970	Ribulose bisphosphate carboxylase, small subunit; Identified by match to protein family HMM PF00101.	Conserved hypothetical protein; Identified by similarity to GB:CAE19006.1.	0.529
sync_0528	cbbS	sync_0528	sync_1966	Carbohydrate kinase, FGGY family protein; Identified by match to protein family HMM PF00370.	Ribulose bisphosphate carboxylase, small subunit; Identified by match to protein family HMM PF00101.	0.579
sync_0528	sync_1946	sync_0528	sync_1946	Carbohydrate kinase, FGGY family protein; Identified by match to protein family HMM PF00370.	Possible pterin-4 alpha-carbinolamine dehydratase-like protein.	0.737
sync_0528	sync_1962	sync_0528	sync_1962	Carbohydrate kinase, FGGY family protein; Identified by match to protein family HMM PF00370.	Carboxysome peptide A; Identified by match to protein family HMM PF03319; match to protein family HMM TIGR02704.	0.733
sync_0528	sync_1963	sync_0528	sync_1963	Carbohydrate kinase, FGGY family protein; Identified by match to protein family HMM PF00370.	Carboxysome peptide A; Identified by match to protein family HMM PF03319; match to protein family HMM TIGR02703.	0.731
sync_0528	sync_1964	sync_0528	sync_1964	Carbohydrate kinase, FGGY family protein; Identified by match to protein family HMM PF00370.	Carboxysome shell protein CsoS3; Identified by match to protein family HMM TIGR02701.	0.733