sync_1968 protein (Synechococcus sp. CC9311)

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sync_1968

Carbon dioxide concentrating mechanism protein ccmK; Identified by match to protein family HMM PF00936. (103 aa)

Predicted Functional Partners:

sync_1963

0.899

sync_1962

0.886

cbbL

0.854

sync_1970

0.826

cbbS

0.806

sync_1964

0.643

sync_1965

0.619

Your Current Organism:

Synechococcus sp. CC9311

NCBI taxonomy Id: 64471
Other names: S. sp. CC9311

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
cbbL	cbbS	sync_1967	sync_1966	Ribulose bisphosphate carboxylase, large subunit; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate in the photorespiration process. Both reactions occur simultaneously and in competition at the same active site. Belongs to the RuBisCO large chain family. Type I subfamily.	Ribulose bisphosphate carboxylase, small subunit; Identified by match to protein family HMM PF00101.	0.999
cbbL	sync_1962	sync_1967	sync_1962	Ribulose bisphosphate carboxylase, large subunit; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate in the photorespiration process. Both reactions occur simultaneously and in competition at the same active site. Belongs to the RuBisCO large chain family. Type I subfamily.	Carboxysome peptide A; Identified by match to protein family HMM PF03319; match to protein family HMM TIGR02704.	0.673
cbbL	sync_1963	sync_1967	sync_1963	Ribulose bisphosphate carboxylase, large subunit; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate in the photorespiration process. Both reactions occur simultaneously and in competition at the same active site. Belongs to the RuBisCO large chain family. Type I subfamily.	Carboxysome peptide A; Identified by match to protein family HMM PF03319; match to protein family HMM TIGR02703.	0.662
cbbL	sync_1964	sync_1967	sync_1964	Ribulose bisphosphate carboxylase, large subunit; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate in the photorespiration process. Both reactions occur simultaneously and in competition at the same active site. Belongs to the RuBisCO large chain family. Type I subfamily.	Carboxysome shell protein CsoS3; Identified by match to protein family HMM TIGR02701.	0.719
cbbL	sync_1965	sync_1967	sync_1965	Ribulose bisphosphate carboxylase, large subunit; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate in the photorespiration process. Both reactions occur simultaneously and in competition at the same active site. Belongs to the RuBisCO large chain family. Type I subfamily.	Hypothetical protein; Identified by Glimmer2; putative.	0.728
cbbL	sync_1968	sync_1967	sync_1968	Ribulose bisphosphate carboxylase, large subunit; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate in the photorespiration process. Both reactions occur simultaneously and in competition at the same active site. Belongs to the RuBisCO large chain family. Type I subfamily.	Carbon dioxide concentrating mechanism protein ccmK; Identified by match to protein family HMM PF00936.	0.854
cbbS	cbbL	sync_1966	sync_1967	Ribulose bisphosphate carboxylase, small subunit; Identified by match to protein family HMM PF00101.	Ribulose bisphosphate carboxylase, large subunit; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate in the photorespiration process. Both reactions occur simultaneously and in competition at the same active site. Belongs to the RuBisCO large chain family. Type I subfamily.	0.999
cbbS	sync_1962	sync_1966	sync_1962	Ribulose bisphosphate carboxylase, small subunit; Identified by match to protein family HMM PF00101.	Carboxysome peptide A; Identified by match to protein family HMM PF03319; match to protein family HMM TIGR02704.	0.886
cbbS	sync_1963	sync_1966	sync_1963	Ribulose bisphosphate carboxylase, small subunit; Identified by match to protein family HMM PF00101.	Carboxysome peptide A; Identified by match to protein family HMM PF03319; match to protein family HMM TIGR02703.	0.882
cbbS	sync_1964	sync_1966	sync_1964	Ribulose bisphosphate carboxylase, small subunit; Identified by match to protein family HMM PF00101.	Carboxysome shell protein CsoS3; Identified by match to protein family HMM TIGR02701.	0.888
cbbS	sync_1965	sync_1966	sync_1965	Ribulose bisphosphate carboxylase, small subunit; Identified by match to protein family HMM PF00101.	Hypothetical protein; Identified by Glimmer2; putative.	0.878
cbbS	sync_1968	sync_1966	sync_1968	Ribulose bisphosphate carboxylase, small subunit; Identified by match to protein family HMM PF00101.	Carbon dioxide concentrating mechanism protein ccmK; Identified by match to protein family HMM PF00936.	0.806
cbbS	sync_1970	sync_1966	sync_1970	Ribulose bisphosphate carboxylase, small subunit; Identified by match to protein family HMM PF00101.	Conserved hypothetical protein; Identified by similarity to GB:CAE19006.1.	0.529
sync_1962	cbbL	sync_1962	sync_1967	Carboxysome peptide A; Identified by match to protein family HMM PF03319; match to protein family HMM TIGR02704.	Ribulose bisphosphate carboxylase, large subunit; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate in the photorespiration process. Both reactions occur simultaneously and in competition at the same active site. Belongs to the RuBisCO large chain family. Type I subfamily.	0.673
sync_1962	cbbS	sync_1962	sync_1966	Carboxysome peptide A; Identified by match to protein family HMM PF03319; match to protein family HMM TIGR02704.	Ribulose bisphosphate carboxylase, small subunit; Identified by match to protein family HMM PF00101.	0.886
sync_1962	sync_1963	sync_1962	sync_1963	Carboxysome peptide A; Identified by match to protein family HMM PF03319; match to protein family HMM TIGR02704.	Carboxysome peptide A; Identified by match to protein family HMM PF03319; match to protein family HMM TIGR02703.	0.818
sync_1962	sync_1964	sync_1962	sync_1964	Carboxysome peptide A; Identified by match to protein family HMM PF03319; match to protein family HMM TIGR02704.	Carboxysome shell protein CsoS3; Identified by match to protein family HMM TIGR02701.	0.952
sync_1962	sync_1965	sync_1962	sync_1965	Carboxysome peptide A; Identified by match to protein family HMM PF03319; match to protein family HMM TIGR02704.	Hypothetical protein; Identified by Glimmer2; putative.	0.952
sync_1962	sync_1968	sync_1962	sync_1968	Carboxysome peptide A; Identified by match to protein family HMM PF03319; match to protein family HMM TIGR02704.	Carbon dioxide concentrating mechanism protein ccmK; Identified by match to protein family HMM PF00936.	0.886
sync_1962	sync_1970	sync_1962	sync_1970	Carboxysome peptide A; Identified by match to protein family HMM PF03319; match to protein family HMM TIGR02704.	Conserved hypothetical protein; Identified by similarity to GB:CAE19006.1.	0.925