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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sync_1991Creatininase; Identified by match to protein family HMM PF02633. (275 aa)    
Predicted Functional Partners:
sync_0740
Identified by match to protein family HMM PF07969.
 
  
  0.951
sync_0338
Creatininase; Identified by match to protein family HMM PF02633.
 
  
 
0.927
sync_1992
Hypothetical protein; Identified by Glimmer2; putative.
       0.773
sync_0741
FAD linked oxidase, N-terminal; Identified by match to protein family HMM PF01565.
     0.674
sync_1990
Conserved hypothetical protein; Catalyzes the decarbonylation of fatty aldehydes to alkanes.
       0.641
sync_1993
Ribosomal protein S1; Identified by match to protein family HMM PF00575.
       0.622
sync_1994
Identified by match to protein family HMM PF06485.
       0.622
sync_1995
Conserved hypothetical protein TIGR00726; Identified by match to protein family HMM PF02578; match to protein family HMM TIGR00726; Belongs to the multicopper oxidase YfiH/RL5 family.
       0.603
sync_1989
Predicted dehydrogenase.
       0.411
Your Current Organism:
Synechococcus sp. CC9311
NCBI taxonomy Id: 64471
Other names: S. sp. CC9311
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