Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
sync_2028Conserved hypothetical protein; Identified by similarity to GB:CAE08294.1. (188 aa)    
Predicted Functional Partners:
argB
Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily.
       0.794
sync_2096
Conserved hypothetical protein.
  
   
 0.762
sync_1690
Conserved hypothetical protein; Identified by similarity to GB:CAE07636.1.
  
     0.757
sync_1581
Identified by match to protein family HMM PF05419.
  
     0.756
sync_2348
3Fe-4S ferredoxin.
  
     0.748
sync_2053
Uncharacterized protein.
  
     0.747
sync_1407
Conserved hypothetical protein; Identified by similarity to GB:CAE20864.1.
  
     0.745
sync_2925
Uncharacterized membrane protein.
  
     0.738
sync_1994
Identified by match to protein family HMM PF06485.
  
     0.729
sync_0765
DnaJ domain protein; Identified by match to protein family HMM PF00226.
  
     0.720
Your Current Organism:
Synechococcus sp. CC9311
NCBI taxonomy Id: 64471
Other names: S. sp. CC9311
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