STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
sync_2044Putative pterin-4a-carbinolamine dehydratase; Identified by match to protein family HMM PF01329. (99 aa)    
Predicted Functional Partners:
sync_2045
Putative cobalamin biosynthesis protein CobW; Identified by match to protein family HMM PF02492; match to protein family HMM PF07683.
       0.797
sync_2043
Hypothetical protein; Identified by Glimmer2; putative.
       0.549
sync_2046
Conserved hypothetical protein.
       0.544
sync_2041
Uncharacterized membrane protein.
       0.430
sync_2042
Hypothetical protein; Identified by Glimmer2; putative.
       0.430
moaC
Molybdenum cofactor biosynthesis protein C; Identified by match to protein family HMM PF01967; match to protein family HMM TIGR00581.
   
  
 0.405
Your Current Organism:
Synechococcus sp. CC9311
NCBI taxonomy Id: 64471
Other names: S. sp. CC9311
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.