STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sync_2059Hypothetical protein; Identified by Glimmer2; putative; Belongs to the OprB family. (348 aa)    
Predicted Functional Partners:
sync_2060
Conserved hypothetical protein; Identified by similarity to GB:CAE21988.1.
       0.773
sync_0306
Repeats containing protein.
  
     0.768
sync_1880
Uncharacterized conserved protein; Identified by match to protein family HMM PF04357.
  
     0.763
sync_1043
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.762
sync_2139
Conserved hypothetical protein.
  
     0.761
sync_2811
Hypothetical protein; Identified by Glimmer2; putative.
 
    0.752
sync_1040
Conserved hypothetical protein.
  
     0.751
sync_1343
Conserved hypothetical protein; Identified by similarity to GB:CAE20910.1.
  
     0.743
sync_2052
Conserved hypothetical protein.
  
     0.740
sync_1019
Conserved hypothetical protein; Identified by similarity to GB:CAE07461.1.
  
     0.739
Your Current Organism:
Synechococcus sp. CC9311
NCBI taxonomy Id: 64471
Other names: S. sp. CC9311
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.