Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| sync_0051 | sync_2141 | sync_0051 | sync_2141 | Putative penicillin-binding protein; Identified by match to protein family HMM PF00905; match to protein family HMM PF03717. | Identified by match to protein family HMM PF02016. | 0.502 |
| sync_1364 | sync_2141 | sync_1364 | sync_2141 | D-alanyl-D-alanine carboxypeptidase; Identified by match to protein family HMM PF02113; match to protein family HMM TIGR00666. | Identified by match to protein family HMM PF02016. | 0.648 |
| sync_1364 | sync_2563 | sync_1364 | sync_2563 | D-alanyl-D-alanine carboxypeptidase; Identified by match to protein family HMM PF02113; match to protein family HMM TIGR00666. | Possible beta-N-acetylglucosaminidase; Identified by match to protein family HMM PF00933. | 0.444 |
| sync_2141 | sync_0051 | sync_2141 | sync_0051 | Identified by match to protein family HMM PF02016. | Putative penicillin-binding protein; Identified by match to protein family HMM PF00905; match to protein family HMM PF03717. | 0.502 |
| sync_2141 | sync_1364 | sync_2141 | sync_1364 | Identified by match to protein family HMM PF02016. | D-alanyl-D-alanine carboxypeptidase; Identified by match to protein family HMM PF02113; match to protein family HMM TIGR00666. | 0.648 |
| sync_2141 | sync_2143 | sync_2141 | sync_2143 | Identified by match to protein family HMM PF02016. | Exopolyphosphatase; Identified by match to protein family HMM PF02541. | 0.567 |
| sync_2141 | sync_2563 | sync_2141 | sync_2563 | Identified by match to protein family HMM PF02016. | Possible beta-N-acetylglucosaminidase; Identified by match to protein family HMM PF00933. | 0.400 |
| sync_2141 | ubiA | sync_2141 | sync_2142 | Identified by match to protein family HMM PF02016. | 4-hydroxybenzoate polyprenyl transferase; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of plastoquinone-9 (PQ-9) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 4-hydroxy-3-solanesylbenzoate. Belongs to the UbiA prenyltransferase family. | 0.787 |
| sync_2143 | sync_2141 | sync_2143 | sync_2141 | Exopolyphosphatase; Identified by match to protein family HMM PF02541. | Identified by match to protein family HMM PF02016. | 0.567 |
| sync_2143 | ubiA | sync_2143 | sync_2142 | Exopolyphosphatase; Identified by match to protein family HMM PF02541. | 4-hydroxybenzoate polyprenyl transferase; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of plastoquinone-9 (PQ-9) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 4-hydroxy-3-solanesylbenzoate. Belongs to the UbiA prenyltransferase family. | 0.617 |
| sync_2563 | sync_1364 | sync_2563 | sync_1364 | Possible beta-N-acetylglucosaminidase; Identified by match to protein family HMM PF00933. | D-alanyl-D-alanine carboxypeptidase; Identified by match to protein family HMM PF02113; match to protein family HMM TIGR00666. | 0.444 |
| sync_2563 | sync_2141 | sync_2563 | sync_2141 | Possible beta-N-acetylglucosaminidase; Identified by match to protein family HMM PF00933. | Identified by match to protein family HMM PF02016. | 0.400 |
| ubiA | sync_2141 | sync_2142 | sync_2141 | 4-hydroxybenzoate polyprenyl transferase; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of plastoquinone-9 (PQ-9) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 4-hydroxy-3-solanesylbenzoate. Belongs to the UbiA prenyltransferase family. | Identified by match to protein family HMM PF02016. | 0.787 |
| ubiA | sync_2143 | sync_2142 | sync_2143 | 4-hydroxybenzoate polyprenyl transferase; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of plastoquinone-9 (PQ-9) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 4-hydroxy-3-solanesylbenzoate. Belongs to the UbiA prenyltransferase family. | Exopolyphosphatase; Identified by match to protein family HMM PF02541. | 0.617 |