STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sync_2161Conserved hypothetical protein. (81 aa)    
Predicted Functional Partners:
sync_2162
Transporter, monovalent cation:proton antiporter-2 (CPA2) family protein; Identified by match to protein family HMM PF00999.
       0.788
sync_2160
Protein of unknown function (DUF1643) family protein; Identified by match to protein family HMM PF07799.
       0.776
sync_0444
Conserved hypothetical protein.
  
     0.774
sync_0697
Conserved hypothetical protein; Identified by similarity to GB:CAE08191.1.
  
     0.773
sync_2159
UDP-N-acetylglucosamine 2-epimerase; Identified by match to protein family HMM PF02350; match to protein family HMM TIGR00236; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
       0.773
sync_2274
Ferredoxin-thioredoxin reductase variable chain.
  
     0.766
sync_1900
Conserved hypothetical protein.
  
     0.765
sync_1639
Conserved hypothetical protein; Identified by similarity to GB:CAE20668.1.
  
     0.764
sync_0330
Conserved hypothetical protein.
  
     0.759
sync_0757
Conserved hypothetical protein.
  
     0.759
Your Current Organism:
Synechococcus sp. CC9311
NCBI taxonomy Id: 64471
Other names: S. sp. CC9311
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.