sync_2169 protein (Synechococcus sp. CC9311)

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Score

sync_2169

Conserved hypothetical protein; Identified by match to protein family HMM PF03929. (103 aa)

Predicted Functional Partners:

rplS

0.691

ndhL

0.642

sync_1881

0.591

sync_1146

0.587

map

0.568

sodX

0.547

sync_0287

0.533

sync_0598

0.510

sync_2124

0.474

sync_2587

0.473

Your Current Organism:

Synechococcus sp. CC9311

NCBI taxonomy Id: 64471
Other names: S. sp. CC9311

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
map	rplS	sync_2170	sync_2168	Methionine aminopeptidase, type I; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.	Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	0.681
map	sync_2169	sync_2170	sync_2169	Methionine aminopeptidase, type I; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.	Conserved hypothetical protein; Identified by match to protein family HMM PF03929.	0.568
ndhL	sync_0287	sync_1912	sync_0287	Possible inorganic carbon transport protein; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon-concentration.	Uncharacterized protein.	0.734
ndhL	sync_0598	sync_1912	sync_0598	Possible inorganic carbon transport protein; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon-concentration.	Uncharacterized protein.	0.727
ndhL	sync_1146	sync_1912	sync_1146	Possible inorganic carbon transport protein; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon-concentration.	Uncharacterized protein.	0.522
ndhL	sync_1881	sync_1912	sync_1881	Possible inorganic carbon transport protein; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon-concentration.	Conserved hypothetical protein.	0.741
ndhL	sync_2124	sync_1912	sync_2124	Possible inorganic carbon transport protein; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon-concentration.	AbrB family transciptional regulator.	0.751
ndhL	sync_2169	sync_1912	sync_2169	Possible inorganic carbon transport protein; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon-concentration.	Conserved hypothetical protein; Identified by match to protein family HMM PF03929.	0.642
ndhL	sync_2587	sync_1912	sync_2587	Possible inorganic carbon transport protein; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon-concentration.	Conserved hypothetical protein; Identified by similarity to GB:CAE22160.1; Belongs to the UPF0367 family.	0.584
rplS	map	sync_2168	sync_2170	Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	Methionine aminopeptidase, type I; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.	0.681
rplS	sync_2169	sync_2168	sync_2169	Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	Conserved hypothetical protein; Identified by match to protein family HMM PF03929.	0.691
sodX	sync_2169	sync_0754	sync_2169	Nickel-type superoxide dismutase maturation protease; Identified by match to protein family HMM PF00717; match to protein family HMM TIGR02754.	Conserved hypothetical protein; Identified by match to protein family HMM PF03929.	0.547
sync_0287	ndhL	sync_0287	sync_1912	Uncharacterized protein.	Possible inorganic carbon transport protein; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon-concentration.	0.734
sync_0287	sync_0598	sync_0287	sync_0598	Uncharacterized protein.	Uncharacterized protein.	0.774
sync_0287	sync_1146	sync_0287	sync_1146	Uncharacterized protein.	Uncharacterized protein.	0.702
sync_0287	sync_1881	sync_0287	sync_1881	Uncharacterized protein.	Conserved hypothetical protein.	0.772
sync_0287	sync_2124	sync_0287	sync_2124	Uncharacterized protein.	AbrB family transciptional regulator.	0.774
sync_0287	sync_2169	sync_0287	sync_2169	Uncharacterized protein.	Conserved hypothetical protein; Identified by match to protein family HMM PF03929.	0.533
sync_0287	sync_2587	sync_0287	sync_2587	Uncharacterized protein.	Conserved hypothetical protein; Identified by similarity to GB:CAE22160.1; Belongs to the UPF0367 family.	0.746
sync_0598	ndhL	sync_0598	sync_1912	Uncharacterized protein.	Possible inorganic carbon transport protein; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon-concentration.	0.727