STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sync_2173Cyanobacteria-specific protein. (172 aa)    
Predicted Functional Partners:
sync_1629
Conserved hypothetical protein; Identified by similarity to GB:CAE07548.1.
  
     0.762
sync_2096
Conserved hypothetical protein.
  
     0.751
sync_2547
VKORC1/thioredoxin domain protein; Identified by match to protein family HMM PF07884.
  
   
 0.744
sync_1994
Identified by match to protein family HMM PF06485.
  
     0.742
sync_2460
Conserved hypothetical protein; Identified by similarity to GB:CAE06850.1; match to protein family HMM PF02325.
 
     0.735
sync_1039
PsbP; Identified by match to protein family HMM PF01789.
  
     0.728
clpS-1
ATP-dependent Clp protease adaptor protein ClpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family.
  
   
 0.712
sync_1432
Uncharacterized membrane protein.
  
     0.710
psaE
Photosystem I reaction center subunit IV; Stabilizes the interaction between PsaC and the PSI core, assists the docking of the ferredoxin to PSI and interacts with ferredoxin-NADP oxidoreductase; Belongs to the PsaE family.
  
     0.701
sync_1366
Conserved hypothetical protein.
  
     0.692
Your Current Organism:
Synechococcus sp. CC9311
NCBI taxonomy Id: 64471
Other names: S. sp. CC9311
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.