Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| cpaB-1 | cpcS | sync_0495 | sync_0492 | C-phycoerythrin class I beta chain; Identified by match to protein family HMM PF00502. | Conserved hypothetical protein; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins. | 0.860 |
| cpaB-1 | sync_0445 | sync_0495 | sync_0445 | C-phycoerythrin class I beta chain; Identified by match to protein family HMM PF00502. | Conserved hypothetical protein. | 0.411 |
| cpaB-1 | sync_0499 | sync_0495 | sync_0499 | C-phycoerythrin class I beta chain; Identified by match to protein family HMM PF00502. | Bilin biosynthesis protein cpeY. | 0.795 |
| cpaB-1 | sync_1142 | sync_0495 | sync_1142 | C-phycoerythrin class I beta chain; Identified by match to protein family HMM PF00502. | Conserved hypothetical protein. | 0.572 |
| cpaB-1 | sync_2176 | sync_0495 | sync_2176 | C-phycoerythrin class I beta chain; Identified by match to protein family HMM PF00502. | Uncharacterized protein. | 0.695 |
| cpcS | cpaB-1 | sync_0492 | sync_0495 | Conserved hypothetical protein; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins. | C-phycoerythrin class I beta chain; Identified by match to protein family HMM PF00502. | 0.860 |
| cpcS | sync_0445 | sync_0492 | sync_0445 | Conserved hypothetical protein; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins. | Conserved hypothetical protein. | 0.530 |
| cpcS | sync_0499 | sync_0492 | sync_0499 | Conserved hypothetical protein; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins. | Bilin biosynthesis protein cpeY. | 0.784 |
| cpcS | sync_1142 | sync_0492 | sync_1142 | Conserved hypothetical protein; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins. | Conserved hypothetical protein. | 0.467 |
| cpcS | sync_2176 | sync_0492 | sync_2176 | Conserved hypothetical protein; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins. | Uncharacterized protein. | 0.698 |
| secE | sync_0287 | sync_2729 | sync_0287 | Preprotein translocase, SecE subunit; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation. | Uncharacterized protein. | 0.774 |
| secE | sync_0345 | sync_2729 | sync_0345 | Preprotein translocase, SecE subunit; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation. | Uncharacterized secreted or membrane protein. | 0.546 |
| secE | sync_0445 | sync_2729 | sync_0445 | Preprotein translocase, SecE subunit; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation. | Conserved hypothetical protein. | 0.774 |
| secE | sync_0469 | sync_2729 | sync_0469 | Preprotein translocase, SecE subunit; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation. | Conserved hypothetical protein; Identified by similarity to GB:CAE21879.1. | 0.769 |
| secE | sync_2176 | sync_2729 | sync_2176 | Preprotein translocase, SecE subunit; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation. | Uncharacterized protein. | 0.732 |
| secE | sync_2713 | sync_2729 | sync_2713 | Preprotein translocase, SecE subunit; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation. | Uncharacterized secreted protein. | 0.762 |
| sync_0287 | secE | sync_0287 | sync_2729 | Uncharacterized protein. | Preprotein translocase, SecE subunit; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation. | 0.774 |
| sync_0287 | sync_0345 | sync_0287 | sync_0345 | Uncharacterized protein. | Uncharacterized secreted or membrane protein. | 0.449 |
| sync_0287 | sync_0445 | sync_0287 | sync_0445 | Uncharacterized protein. | Conserved hypothetical protein. | 0.772 |
| sync_0287 | sync_0469 | sync_0287 | sync_0469 | Uncharacterized protein. | Conserved hypothetical protein; Identified by similarity to GB:CAE21879.1. | 0.770 |
page 1 of 4