STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sync_2206Conserved hypothetical protein. (191 aa)    
Predicted Functional Partners:
sync_2207
Cyanobacteria-specific protein containing UvrC-like endonuclease domain.
       0.803
sync_0963
Conserved hypothetical protein.
  
     0.767
gspO
Prepilin peptidase; Identified by similarity to SP:P31712; match to protein family HMM PF01478; match to protein family HMM PF06750.
   
  
 0.759
sync_1024
Conserved hypothetical protein.
  
     0.758
sync_1343
Conserved hypothetical protein; Identified by similarity to GB:CAE20910.1.
  
     0.755
sync_1615
Conserved hypothetical protein.
  
     0.752
sync_1205
Conserved hypothetical protein.
  
     0.749
sync_2052
Conserved hypothetical protein.
  
     0.746
sync_2628
Conserved hypothetical protein.
  
     0.744
sync_1900
Conserved hypothetical protein.
  
     0.725
Your Current Organism:
Synechococcus sp. CC9311
NCBI taxonomy Id: 64471
Other names: S. sp. CC9311
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.