Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
sync_2207Cyanobacteria-specific protein containing UvrC-like endonuclease domain. (216 aa)    
Predicted Functional Partners:
sync_2206
Conserved hypothetical protein.
       0.803
pepA
Peptidase, M17 (leucyl aminopeptidase) family protein; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides.
       0.708
sync_2884
Predicted redox protein.
  
     0.652
sync_0591
Membrane protein, putative.
  
     0.643
sync_2205
Possible DNA-binding response regulator; Identified by match to protein family HMM PF00196.
       0.620
sync_0631
Ribonucleotide reductase (Class II); Identified by match to protein family HMM PF05768.
  
     0.589
sync_2209
Hypothetical protein; Identified by Glimmer2; putative.
       0.561
sync_2204
Uncharacterized protein.
       0.559
sync_1754
Putative membrane protein; Identified by similarity to GB:CAE20407.1.
  
     0.555
sync_0771
Uncharacterized protein.
  
     0.550
Your Current Organism:
Synechococcus sp. CC9311
NCBI taxonomy Id: 64471
Other names: S. sp. CC9311
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