Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| pepA | sync_2205 | sync_2208 | sync_2205 | Peptidase, M17 (leucyl aminopeptidase) family protein; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides. | Possible DNA-binding response regulator; Identified by match to protein family HMM PF00196. | 0.525 |
| pepA | sync_2206 | sync_2208 | sync_2206 | Peptidase, M17 (leucyl aminopeptidase) family protein; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides. | Conserved hypothetical protein. | 0.664 |
| pepA | sync_2207 | sync_2208 | sync_2207 | Peptidase, M17 (leucyl aminopeptidase) family protein; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides. | Cyanobacteria-specific protein containing UvrC-like endonuclease domain. | 0.690 |
| pepA | sync_2209 | sync_2208 | sync_2209 | Peptidase, M17 (leucyl aminopeptidase) family protein; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides. | Hypothetical protein; Identified by Glimmer2; putative. | 0.671 |
| sync_0591 | sync_1356 | sync_0591 | sync_1356 | Membrane protein, putative. | Hypothetical protein. | 0.630 |
| sync_0591 | sync_2207 | sync_0591 | sync_2207 | Membrane protein, putative. | Cyanobacteria-specific protein containing UvrC-like endonuclease domain. | 0.643 |
| sync_0631 | sync_1356 | sync_0631 | sync_1356 | Ribonucleotide reductase (Class II); Identified by match to protein family HMM PF05768. | Hypothetical protein. | 0.422 |
| sync_0631 | sync_2207 | sync_0631 | sync_2207 | Ribonucleotide reductase (Class II); Identified by match to protein family HMM PF05768. | Cyanobacteria-specific protein containing UvrC-like endonuclease domain. | 0.589 |
| sync_0771 | sync_1754 | sync_0771 | sync_1754 | Uncharacterized protein. | Putative membrane protein; Identified by similarity to GB:CAE20407.1. | 0.561 |
| sync_0771 | sync_2207 | sync_0771 | sync_2207 | Uncharacterized protein. | Cyanobacteria-specific protein containing UvrC-like endonuclease domain. | 0.550 |
| sync_1356 | sync_0591 | sync_1356 | sync_0591 | Hypothetical protein. | Membrane protein, putative. | 0.630 |
| sync_1356 | sync_0631 | sync_1356 | sync_0631 | Hypothetical protein. | Ribonucleotide reductase (Class II); Identified by match to protein family HMM PF05768. | 0.422 |
| sync_1356 | sync_2207 | sync_1356 | sync_2207 | Hypothetical protein. | Cyanobacteria-specific protein containing UvrC-like endonuclease domain. | 0.547 |
| sync_1754 | sync_0771 | sync_1754 | sync_0771 | Putative membrane protein; Identified by similarity to GB:CAE20407.1. | Uncharacterized protein. | 0.561 |
| sync_1754 | sync_2207 | sync_1754 | sync_2207 | Putative membrane protein; Identified by similarity to GB:CAE20407.1. | Cyanobacteria-specific protein containing UvrC-like endonuclease domain. | 0.555 |
| sync_2205 | pepA | sync_2205 | sync_2208 | Possible DNA-binding response regulator; Identified by match to protein family HMM PF00196. | Peptidase, M17 (leucyl aminopeptidase) family protein; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides. | 0.525 |
| sync_2205 | sync_2206 | sync_2205 | sync_2206 | Possible DNA-binding response regulator; Identified by match to protein family HMM PF00196. | Conserved hypothetical protein. | 0.620 |
| sync_2205 | sync_2207 | sync_2205 | sync_2207 | Possible DNA-binding response regulator; Identified by match to protein family HMM PF00196. | Cyanobacteria-specific protein containing UvrC-like endonuclease domain. | 0.620 |
| sync_2205 | sync_2209 | sync_2205 | sync_2209 | Possible DNA-binding response regulator; Identified by match to protein family HMM PF00196. | Hypothetical protein; Identified by Glimmer2; putative. | 0.458 |
| sync_2206 | pepA | sync_2206 | sync_2208 | Conserved hypothetical protein. | Peptidase, M17 (leucyl aminopeptidase) family protein; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides. | 0.664 |
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