STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sync_2246Glucosamine-6-phosphate isomerase; Identified by match to protein family HMM PF01182. (241 aa)    
Predicted Functional Partners:
sync_2639
N-acetylglucosamine-6-phosphate deacetylase.
 0.997
pgi
Glucose-6-phosphate isomerase; Identified by match to protein family HMM PF00342; Belongs to the GPI family.
  
 0.926
sync_0326
BadF/BadG/BcrA/BcrD ATPase family superfamily; Identified by match to protein family HMM PF01869.
 
 
 0.923
sync_0160
Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; Identified by match to protein family HMM PF00483; match to protein family HMM PF01050; match to protein family HMM PF07883; match to protein family HMM TIGR01479; Belongs to the mannose-6-phosphate isomerase type 2 family.
   
 0.919
glmS
Glucosamine--fructose-6-phosphate aminotransferase, isomerizing; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
  
 
 0.918
glmM
Phosphotransferase superclass; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.
  
 
 0.909
sync_0103
Sugar kinase, ribokinase family protein; Identified by match to protein family HMM PF00294.
  
 
 0.905
sync_1052
Mannose-6-phosphate isomerase; Identified by match to protein family HMM PF01050.
     
 0.902
sync_2244
Hypothetical protein; Identified by Glimmer2; putative.
       0.773
oplaH
Hydantoinase/oxoprolinase:Hydantoinase B/oxoprolinase; Identified by match to protein family HMM PF01968; match to protein family HMM PF02538; match to protein family HMM PF05378.
       0.773
Your Current Organism:
Synechococcus sp. CC9311
NCBI taxonomy Id: 64471
Other names: S. sp. CC9311
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