sync_2248 protein (Synechococcus sp. CC9311)

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sync_2248

SpoIID/LytB domain protein; Identified by match to protein family HMM TIGR02669. (461 aa)

Predicted Functional Partners:

sync_1406

0.633

oplaH

0.630

rnz

0.608

sync_2246

0.587

sync_2244

0.565

sync_0323

0.406

Your Current Organism:

Synechococcus sp. CC9311

NCBI taxonomy Id: 64471
Other names: S. sp. CC9311

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
oplaH	sync_2244	sync_2245	sync_2244	Hydantoinase/oxoprolinase:Hydantoinase B/oxoprolinase; Identified by match to protein family HMM PF01968; match to protein family HMM PF02538; match to protein family HMM PF05378.	Hypothetical protein; Identified by Glimmer2; putative.	0.773
oplaH	sync_2246	sync_2245	sync_2246	Hydantoinase/oxoprolinase:Hydantoinase B/oxoprolinase; Identified by match to protein family HMM PF01968; match to protein family HMM PF02538; match to protein family HMM PF05378.	Glucosamine-6-phosphate isomerase; Identified by match to protein family HMM PF01182.	0.773
oplaH	sync_2248	sync_2245	sync_2248	Hydantoinase/oxoprolinase:Hydantoinase B/oxoprolinase; Identified by match to protein family HMM PF01968; match to protein family HMM PF02538; match to protein family HMM PF05378.	SpoIID/LytB domain protein; Identified by match to protein family HMM TIGR02669.	0.630
rnz	sync_2248	sync_2249	sync_2248	Ribonuclease Z (RNase Z) (tRNA 3 endonuclease); Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA; Belongs to the RNase Z family.	SpoIID/LytB domain protein; Identified by match to protein family HMM TIGR02669.	0.608
sync_0323	sync_2248	sync_0323	sync_2248	Identified by match to protein family HMM PF01464.	SpoIID/LytB domain protein; Identified by match to protein family HMM TIGR02669.	0.406
sync_1406	sync_2248	sync_1406	sync_2248	Conserved hypothetical protein.	SpoIID/LytB domain protein; Identified by match to protein family HMM TIGR02669.	0.633
sync_2244	oplaH	sync_2244	sync_2245	Hypothetical protein; Identified by Glimmer2; putative.	Hydantoinase/oxoprolinase:Hydantoinase B/oxoprolinase; Identified by match to protein family HMM PF01968; match to protein family HMM PF02538; match to protein family HMM PF05378.	0.773
sync_2244	sync_2246	sync_2244	sync_2246	Hypothetical protein; Identified by Glimmer2; putative.	Glucosamine-6-phosphate isomerase; Identified by match to protein family HMM PF01182.	0.773
sync_2244	sync_2248	sync_2244	sync_2248	Hypothetical protein; Identified by Glimmer2; putative.	SpoIID/LytB domain protein; Identified by match to protein family HMM TIGR02669.	0.565
sync_2246	oplaH	sync_2246	sync_2245	Glucosamine-6-phosphate isomerase; Identified by match to protein family HMM PF01182.	Hydantoinase/oxoprolinase:Hydantoinase B/oxoprolinase; Identified by match to protein family HMM PF01968; match to protein family HMM PF02538; match to protein family HMM PF05378.	0.773
sync_2246	sync_2244	sync_2246	sync_2244	Glucosamine-6-phosphate isomerase; Identified by match to protein family HMM PF01182.	Hypothetical protein; Identified by Glimmer2; putative.	0.773
sync_2246	sync_2248	sync_2246	sync_2248	Glucosamine-6-phosphate isomerase; Identified by match to protein family HMM PF01182.	SpoIID/LytB domain protein; Identified by match to protein family HMM TIGR02669.	0.587
sync_2248	oplaH	sync_2248	sync_2245	SpoIID/LytB domain protein; Identified by match to protein family HMM TIGR02669.	Hydantoinase/oxoprolinase:Hydantoinase B/oxoprolinase; Identified by match to protein family HMM PF01968; match to protein family HMM PF02538; match to protein family HMM PF05378.	0.630
sync_2248	rnz	sync_2248	sync_2249	SpoIID/LytB domain protein; Identified by match to protein family HMM TIGR02669.	Ribonuclease Z (RNase Z) (tRNA 3 endonuclease); Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA; Belongs to the RNase Z family.	0.608
sync_2248	sync_0323	sync_2248	sync_0323	SpoIID/LytB domain protein; Identified by match to protein family HMM TIGR02669.	Identified by match to protein family HMM PF01464.	0.406
sync_2248	sync_1406	sync_2248	sync_1406	SpoIID/LytB domain protein; Identified by match to protein family HMM TIGR02669.	Conserved hypothetical protein.	0.633
sync_2248	sync_2244	sync_2248	sync_2244	SpoIID/LytB domain protein; Identified by match to protein family HMM TIGR02669.	Hypothetical protein; Identified by Glimmer2; putative.	0.565
sync_2248	sync_2246	sync_2248	sync_2246	SpoIID/LytB domain protein; Identified by match to protein family HMM TIGR02669.	Glucosamine-6-phosphate isomerase; Identified by match to protein family HMM PF01182.	0.587