sync_2268 protein (Synechococcus sp. CC9311)

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Predicted Interactions

gene neighborhood

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textmining

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Score

sync_2268

Conserved hypothetical protein; Identified by similarity to GB:CAE21616.1. (122 aa)

Predicted Functional Partners:

rpoZ

0.945

sync_0215

0.770

sync_0313

0.758

sync_0892

0.749

sync_1203

0.744

sync_0697

0.727

sync_2559

0.726

sync_0769

0.725

sync_0594

0.716

sync_2270

0.693

Your Current Organism:

Synechococcus sp. CC9311

NCBI taxonomy Id: 64471
Other names: S. sp. CC9311

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
rpoZ	sync_0215	sync_2269	sync_0215	Putative DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	Conserved hypothetical protein; Identified by similarity to GB:AAQ00795.1.	0.549
rpoZ	sync_0313	sync_2269	sync_0313	Putative DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	Uncharacterized protein.	0.746
rpoZ	sync_0594	sync_2269	sync_0594	Putative DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	Conserved hypothetical protein.	0.758
rpoZ	sync_0769	sync_2269	sync_0769	Putative DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	Uncharacterized conserved membrane protein; Belongs to the BI1 family.	0.420
rpoZ	sync_0892	sync_2269	sync_0892	Putative DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	Ferredoxin; Identified by match to protein family HMM PF00111.	0.755
rpoZ	sync_1203	sync_2269	sync_1203	Putative DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	Uncharacterized membrane protein.	0.719
rpoZ	sync_2268	sync_2269	sync_2268	Putative DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	Conserved hypothetical protein; Identified by similarity to GB:CAE21616.1.	0.945
rpoZ	sync_2270	sync_2269	sync_2270	Putative DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	Possible Ribosomal protein L36.	0.699
rpoZ	sync_2559	sync_2269	sync_2559	Putative DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	Conserved hypothetical protein.	0.649
sync_0215	rpoZ	sync_0215	sync_2269	Conserved hypothetical protein; Identified by similarity to GB:AAQ00795.1.	Putative DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.549
sync_0215	sync_0313	sync_0215	sync_0313	Conserved hypothetical protein; Identified by similarity to GB:AAQ00795.1.	Uncharacterized protein.	0.755
sync_0215	sync_0594	sync_0215	sync_0594	Conserved hypothetical protein; Identified by similarity to GB:AAQ00795.1.	Conserved hypothetical protein.	0.690
sync_0215	sync_0697	sync_0215	sync_0697	Conserved hypothetical protein; Identified by similarity to GB:AAQ00795.1.	Conserved hypothetical protein; Identified by similarity to GB:CAE08191.1.	0.712
sync_0215	sync_0769	sync_0215	sync_0769	Conserved hypothetical protein; Identified by similarity to GB:AAQ00795.1.	Uncharacterized conserved membrane protein; Belongs to the BI1 family.	0.696
sync_0215	sync_0892	sync_0215	sync_0892	Conserved hypothetical protein; Identified by similarity to GB:AAQ00795.1.	Ferredoxin; Identified by match to protein family HMM PF00111.	0.771
sync_0215	sync_1203	sync_0215	sync_1203	Conserved hypothetical protein; Identified by similarity to GB:AAQ00795.1.	Uncharacterized membrane protein.	0.650
sync_0215	sync_2268	sync_0215	sync_2268	Conserved hypothetical protein; Identified by similarity to GB:AAQ00795.1.	Conserved hypothetical protein; Identified by similarity to GB:CAE21616.1.	0.770
sync_0215	sync_2559	sync_0215	sync_2559	Conserved hypothetical protein; Identified by similarity to GB:AAQ00795.1.	Conserved hypothetical protein.	0.707
sync_0313	rpoZ	sync_0313	sync_2269	Uncharacterized protein.	Putative DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.746
sync_0313	sync_0215	sync_0313	sync_0215	Uncharacterized protein.	Conserved hypothetical protein; Identified by similarity to GB:AAQ00795.1.	0.755