STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sync_2288Predicted HAD superfamily phosphatase; Identified by match to protein family HMM TIGR01548. (271 aa)    
Predicted Functional Partners:
sync_2289
Calcium/proton antiporter; Identified by match to protein family HMM PF01699.
       0.773
sync_2287
Putative fructose-6-phosphate aldolase; Identified by match to protein family HMM PF00923.
  
  
 0.768
sync_2257
Uncharacterized conserved membrane protein.
  
     0.669
sync_1265
Ribonucleotide reductase (Class II); Identified by match to protein family HMM TIGR02505.
  
     0.663
sync_1716
Conserved hypothetical protein; Identified by similarity to GB:CAE20702.1.
  
     0.657
sync_0794
Uncharacterized membrane protein.
  
     0.646
sync_2286
Ycf65 homolog; Probably a ribosomal protein or a ribosome-associated protein; Belongs to the chloroplast-specific ribosomal protein cS23 family.
 
     0.643
sync_0330
Conserved hypothetical protein.
  
     0.623
sync_1203
Uncharacterized membrane protein.
  
     0.607
sync_0470
Possible Pex protein.
 
     0.594
Your Current Organism:
Synechococcus sp. CC9311
NCBI taxonomy Id: 64471
Other names: S. sp. CC9311
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.