Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
sync_2391Putative membrane protein. (220 aa)    
Predicted Functional Partners:
sync_2390
Predicted glutathione S-transferase; Identified by match to protein family HMM PF00043.
       0.812
sync_2392
ABC transporter, ATP binding domain; Identified by match to protein family HMM PF00005.
       0.781
thf1
Uncharacterized protein; May be involved in photosynthetic membrane biogenesis.
  
     0.757
sync_1329
Conserved hypothetical protein.
  
   
 0.750
sync_2925
Uncharacterized membrane protein.
  
     0.739
sync_2150
Conserved hypothetical protein.
  
     0.728
sync_2041
Uncharacterized membrane protein.
  
     0.689
pcxA
CemA family protein; Involved in light-induced Na(+)-dependent proton extrusion. Also seems to be involved in CO(2) transport; Belongs to the Cema family.
  
     0.662
sync_1039
PsbP; Identified by match to protein family HMM PF01789.
  
     0.648
psbO
Photosystem II manganese-stabilizing protein; Identified by match to protein family HMM PF01716.
  
     0.644
Your Current Organism:
Synechococcus sp. CC9311
NCBI taxonomy Id: 64471
Other names: S. sp. CC9311
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