STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sync_2391Putative membrane protein. (220 aa)    
Predicted Functional Partners:
sync_2390
Predicted glutathione S-transferase; Identified by match to protein family HMM PF00043.
       0.812
sync_2392
ABC transporter, ATP binding domain; Identified by match to protein family HMM PF00005.
       0.778
thf1
Uncharacterized protein; May be involved in photosynthetic membrane biogenesis.
  
     0.757
sync_2925
Uncharacterized membrane protein.
  
     0.739
sync_1329
Conserved hypothetical protein.
  
     0.734
sync_2150
Conserved hypothetical protein.
  
     0.728
sync_2041
Uncharacterized membrane protein.
  
     0.689
pcxA
CemA family protein; Involved in light-induced Na(+)-dependent proton extrusion. Also seems to be involved in CO(2) transport; Belongs to the Cema family.
  
     0.662
sync_1039
PsbP; Identified by match to protein family HMM PF01789.
  
     0.648
psbO
Photosystem II manganese-stabilizing protein; Identified by match to protein family HMM PF01716.
  
     0.644
Your Current Organism:
Synechococcus sp. CC9311
NCBI taxonomy Id: 64471
Other names: S. sp. CC9311
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