Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| obg | sync_2395 | sync_2394 | sync_2395 | GTP-binding protein, GTP1/OBG family protein; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. | Ferric iron ABC transporter (FeT) family, ATP-binding protein; Identified by match to protein family HMM PF00005; Belongs to the ABC transporter superfamily. | 0.588 |
| sync_0114 | sync_0977 | sync_0114 | sync_0977 | Bacterial extracellular solute-binding protein, family 1; Identified by match to protein family HMM PF01547. | Putative sn-glycerol-3-phosphate ABC transporter, permease protein; Identified by match to protein family HMM PF00528. | 0.980 |
| sync_0114 | sync_1403 | sync_0114 | sync_1403 | Bacterial extracellular solute-binding protein, family 1; Identified by match to protein family HMM PF01547. | ABC transporter for sugars, membrane component; Identified by match to protein family HMM PF00528. | 0.841 |
| sync_0114 | sync_1404 | sync_0114 | sync_1404 | Bacterial extracellular solute-binding protein, family 1; Identified by match to protein family HMM PF01547. | ABC transporter component, likely for sugar transport; Identified by match to protein family HMM PF00528. | 0.842 |
| sync_0114 | sync_1405 | sync_0114 | sync_1405 | Bacterial extracellular solute-binding protein, family 1; Identified by match to protein family HMM PF01547. | ABC transporter for sugars, ATP binding protein; Identified by match to protein family HMM PF00005; Belongs to the ABC transporter superfamily. | 0.599 |
| sync_0114 | sync_1429 | sync_0114 | sync_1429 | Bacterial extracellular solute-binding protein, family 1; Identified by match to protein family HMM PF01547. | Lactose transport system permease protein; Identified by match to protein family HMM PF00528. | 0.978 |
| sync_0114 | sync_2395 | sync_0114 | sync_2395 | Bacterial extracellular solute-binding protein, family 1; Identified by match to protein family HMM PF01547. | Ferric iron ABC transporter (FeT) family, ATP-binding protein; Identified by match to protein family HMM PF00005; Belongs to the ABC transporter superfamily. | 0.710 |
| sync_0977 | sync_0114 | sync_0977 | sync_0114 | Putative sn-glycerol-3-phosphate ABC transporter, permease protein; Identified by match to protein family HMM PF00528. | Bacterial extracellular solute-binding protein, family 1; Identified by match to protein family HMM PF01547. | 0.980 |
| sync_0977 | sync_1402 | sync_0977 | sync_1402 | Putative sn-glycerol-3-phosphate ABC transporter, permease protein; Identified by match to protein family HMM PF00528. | ABC transporter for sugars, solute-binding protein; Identified by match to protein family HMM PF01547. | 0.835 |
| sync_0977 | sync_1403 | sync_0977 | sync_1403 | Putative sn-glycerol-3-phosphate ABC transporter, permease protein; Identified by match to protein family HMM PF00528. | ABC transporter for sugars, membrane component; Identified by match to protein family HMM PF00528. | 0.969 |
| sync_0977 | sync_1405 | sync_0977 | sync_1405 | Putative sn-glycerol-3-phosphate ABC transporter, permease protein; Identified by match to protein family HMM PF00528. | ABC transporter for sugars, ATP binding protein; Identified by match to protein family HMM PF00005; Belongs to the ABC transporter superfamily. | 0.943 |
| sync_0977 | sync_1429 | sync_0977 | sync_1429 | Putative sn-glycerol-3-phosphate ABC transporter, permease protein; Identified by match to protein family HMM PF00528. | Lactose transport system permease protein; Identified by match to protein family HMM PF00528. | 0.993 |
| sync_0977 | sync_2395 | sync_0977 | sync_2395 | Putative sn-glycerol-3-phosphate ABC transporter, permease protein; Identified by match to protein family HMM PF00528. | Ferric iron ABC transporter (FeT) family, ATP-binding protein; Identified by match to protein family HMM PF00005; Belongs to the ABC transporter superfamily. | 0.954 |
| sync_0977 | sync_2811 | sync_0977 | sync_2811 | Putative sn-glycerol-3-phosphate ABC transporter, permease protein; Identified by match to protein family HMM PF00528. | Hypothetical protein; Identified by Glimmer2; putative. | 0.666 |
| sync_1288 | sync_2395 | sync_1288 | sync_2395 | Possible ABC transporter, ATP binding component; Identified by match to protein family HMM PF00005. | Ferric iron ABC transporter (FeT) family, ATP-binding protein; Identified by match to protein family HMM PF00005; Belongs to the ABC transporter superfamily. | 0.676 |
| sync_1402 | sync_0977 | sync_1402 | sync_0977 | ABC transporter for sugars, solute-binding protein; Identified by match to protein family HMM PF01547. | Putative sn-glycerol-3-phosphate ABC transporter, permease protein; Identified by match to protein family HMM PF00528. | 0.835 |
| sync_1402 | sync_1403 | sync_1402 | sync_1403 | ABC transporter for sugars, solute-binding protein; Identified by match to protein family HMM PF01547. | ABC transporter for sugars, membrane component; Identified by match to protein family HMM PF00528. | 0.988 |
| sync_1402 | sync_1404 | sync_1402 | sync_1404 | ABC transporter for sugars, solute-binding protein; Identified by match to protein family HMM PF01547. | ABC transporter component, likely for sugar transport; Identified by match to protein family HMM PF00528. | 0.983 |
| sync_1402 | sync_1405 | sync_1402 | sync_1405 | ABC transporter for sugars, solute-binding protein; Identified by match to protein family HMM PF01547. | ABC transporter for sugars, ATP binding protein; Identified by match to protein family HMM PF00005; Belongs to the ABC transporter superfamily. | 0.897 |
| sync_1402 | sync_1429 | sync_1402 | sync_1429 | ABC transporter for sugars, solute-binding protein; Identified by match to protein family HMM PF01547. | Lactose transport system permease protein; Identified by match to protein family HMM PF00528. | 0.846 |
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