STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sync_2462Conserved hypothetical protein; Identified by similarity to GB:CAE21766.1; match to protein family HMM PF07444. (323 aa)    
Predicted Functional Partners:
sync_2464
Lipoprotein, putative.
 
     0.869
sync_2463
Lipoprotein, putative.
 
     0.868
sync_2610
Uncharacterized protein.
  
     0.774
sync_1222
Conserved hypothetical protein.
  
     0.770
sync_2572
Conserved hypothetical protein.
  
     0.767
psbI
Photosystem II reaction center I protein; One of the components of the core complex of photosystem II (PSII), required for its stability and/or assembly. PSII is a light- driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation.
  
     0.760
sync_1305
Uncharacterized protein.
  
     0.749
sync_2455
PRC-barrel domain protein; Identified by match to protein family HMM PF05239.
  
     0.727
sync_0330
Conserved hypothetical protein.
  
     0.723
sync_0769
Uncharacterized conserved membrane protein; Belongs to the BI1 family.
  
     0.703
Your Current Organism:
Synechococcus sp. CC9311
NCBI taxonomy Id: 64471
Other names: S. sp. CC9311
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