Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| apcA | apcB-1 | sync_2323 | sync_1567 | Allophycocyanin, alpha subunit; Identified by match to protein family HMM PF00502. | Allophycocyanin, beta subunit; Identified by match to protein family HMM PF00502. | 0.999 |
| apcA | apcB-2 | sync_2323 | sync_2324 | Allophycocyanin, alpha subunit; Identified by match to protein family HMM PF00502. | Allophycocyanin, beta subunit; Identified by match to protein family HMM PF00502; match to protein family HMM TIGR01337. | 0.999 |
| apcA | apcC | sync_2323 | sync_2325 | Allophycocyanin, alpha subunit; Identified by match to protein family HMM PF00502. | Phycobilisome 7.8 kDa linker polypeptide, allophycocyanin-associated, core; Rod linker protein, associated with allophycocyanin. Linker polypeptides determine the state of aggregation and the location of the disk-shaped phycobiliprotein units within the phycobilisome and modulate their spectroscopic properties in order to mediate a directed and optimal energy transfer. | 0.999 |
| apcA | apcD | sync_2323 | sync_1341 | Allophycocyanin, alpha subunit; Identified by match to protein family HMM PF00502. | Allophycocyanin alpha, B subunit; Identified by similarity to SP:P80556; match to protein family HMM PF00502. | 0.984 |
| apcA | cpcA | sync_2323 | sync_0488 | Allophycocyanin, alpha subunit; Identified by match to protein family HMM PF00502. | Phycocyanin, alpha subunit; Identified by match to protein family HMM PF00502; match to protein family HMM TIGR01338. | 0.949 |
| apcA | cpcB | sync_2323 | sync_0489 | Allophycocyanin, alpha subunit; Identified by match to protein family HMM PF00502. | Phycocyanin, beta subunit; Identified by match to protein family HMM PF00502; match to protein family HMM TIGR01339. | 0.938 |
| apcA | cpcE | sync_2323 | sync_0486 | Allophycocyanin, alpha subunit; Identified by match to protein family HMM PF00502. | Phycocyanin alpha subunit phycocyanobilin lyase, CpcE subunit; Identified by match to protein family HMM PF03130. | 0.853 |
| apcA | cpcF | sync_2323 | sync_0485 | Allophycocyanin, alpha subunit; Identified by match to protein family HMM PF00502. | Phycocyanin alpha subunit phycocyanobilin lyase, CpcF subunit; Identified by match to protein family HMM PF03130. | 0.820 |
| apcA | cpcG1 | sync_2323 | sync_2488 | Allophycocyanin, alpha subunit; Identified by match to protein family HMM PF00502. | Phycobilisome rod-core linker polypeptide cpcG1; Identified by similarity to SP:P29986; match to protein family HMM PF00427; Belongs to the phycobilisome linker protein family. | 0.968 |
| apcA | sync_0516 | sync_2323 | sync_0516 | Allophycocyanin, alpha subunit; Identified by match to protein family HMM PF00502. | Possible phycobilisome linker polypeptide; Identified by match to protein family HMM PF00427; Belongs to the phycobilisome linker protein family. | 0.900 |
| apcB-1 | apcA | sync_1567 | sync_2323 | Allophycocyanin, beta subunit; Identified by match to protein family HMM PF00502. | Allophycocyanin, alpha subunit; Identified by match to protein family HMM PF00502. | 0.999 |
| apcB-1 | apcB-2 | sync_1567 | sync_2324 | Allophycocyanin, beta subunit; Identified by match to protein family HMM PF00502. | Allophycocyanin, beta subunit; Identified by match to protein family HMM PF00502; match to protein family HMM TIGR01337. | 0.999 |
| apcB-1 | apcC | sync_1567 | sync_2325 | Allophycocyanin, beta subunit; Identified by match to protein family HMM PF00502. | Phycobilisome 7.8 kDa linker polypeptide, allophycocyanin-associated, core; Rod linker protein, associated with allophycocyanin. Linker polypeptides determine the state of aggregation and the location of the disk-shaped phycobiliprotein units within the phycobilisome and modulate their spectroscopic properties in order to mediate a directed and optimal energy transfer. | 0.999 |
| apcB-1 | apcD | sync_1567 | sync_1341 | Allophycocyanin, beta subunit; Identified by match to protein family HMM PF00502. | Allophycocyanin alpha, B subunit; Identified by similarity to SP:P80556; match to protein family HMM PF00502. | 0.988 |
| apcB-1 | cpcA | sync_1567 | sync_0488 | Allophycocyanin, beta subunit; Identified by match to protein family HMM PF00502. | Phycocyanin, alpha subunit; Identified by match to protein family HMM PF00502; match to protein family HMM TIGR01338. | 0.900 |
| apcB-1 | cpcB | sync_1567 | sync_0489 | Allophycocyanin, beta subunit; Identified by match to protein family HMM PF00502. | Phycocyanin, beta subunit; Identified by match to protein family HMM PF00502; match to protein family HMM TIGR01339. | 0.842 |
| apcB-1 | cpcE | sync_1567 | sync_0486 | Allophycocyanin, beta subunit; Identified by match to protein family HMM PF00502. | Phycocyanin alpha subunit phycocyanobilin lyase, CpcE subunit; Identified by match to protein family HMM PF03130. | 0.852 |
| apcB-1 | cpcF | sync_1567 | sync_0485 | Allophycocyanin, beta subunit; Identified by match to protein family HMM PF00502. | Phycocyanin alpha subunit phycocyanobilin lyase, CpcF subunit; Identified by match to protein family HMM PF03130. | 0.768 |
| apcB-1 | cpcG1 | sync_1567 | sync_2488 | Allophycocyanin, beta subunit; Identified by match to protein family HMM PF00502. | Phycobilisome rod-core linker polypeptide cpcG1; Identified by similarity to SP:P29986; match to protein family HMM PF00427; Belongs to the phycobilisome linker protein family. | 0.967 |
| apcB-1 | sync_0516 | sync_1567 | sync_0516 | Allophycocyanin, beta subunit; Identified by match to protein family HMM PF00502. | Possible phycobilisome linker polypeptide; Identified by match to protein family HMM PF00427; Belongs to the phycobilisome linker protein family. | 0.855 |
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