sync_2559 protein (Synechococcus sp. CC9311)

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Predicted Interactions

gene neighborhood

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textmining

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Score

sync_2559

Conserved hypothetical protein. (232 aa)

Predicted Functional Partners:

sync_0892

0.765

sync_1559

0.736

sync_0313

0.726

sync_2268

0.726

sync_0215

0.707

secE

0.691

sync_2544

0.687

rpoZ

0.649

sync_1524

0.642

sync_0890

0.626

Your Current Organism:

Synechococcus sp. CC9311

NCBI taxonomy Id: 64471
Other names: S. sp. CC9311

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
rpoZ	secE	sync_2269	sync_2729	Putative DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	Preprotein translocase, SecE subunit; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.	0.799
rpoZ	sync_0215	sync_2269	sync_0215	Putative DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	Conserved hypothetical protein; Identified by similarity to GB:AAQ00795.1.	0.549
rpoZ	sync_0313	sync_2269	sync_0313	Putative DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	Uncharacterized protein.	0.746
rpoZ	sync_0892	sync_2269	sync_0892	Putative DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	Ferredoxin; Identified by match to protein family HMM PF00111.	0.755
rpoZ	sync_1524	sync_2269	sync_1524	Putative DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	Uncharacterized protein.	0.692
rpoZ	sync_1559	sync_2269	sync_1559	Putative DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	Conserved hypothetical protein; Identified by similarity to GB:AAQ00075.1.	0.631
rpoZ	sync_2268	sync_2269	sync_2268	Putative DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	Conserved hypothetical protein; Identified by similarity to GB:CAE21616.1.	0.945
rpoZ	sync_2544	sync_2269	sync_2544	Putative DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	Putative membrane protein; Identified by similarity to GB:CAE20354.1.	0.767
rpoZ	sync_2559	sync_2269	sync_2559	Putative DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	Conserved hypothetical protein.	0.649
secE	rpoZ	sync_2729	sync_2269	Preprotein translocase, SecE subunit; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.	Putative DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.799
secE	sync_0215	sync_2729	sync_0215	Preprotein translocase, SecE subunit; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.	Conserved hypothetical protein; Identified by similarity to GB:AAQ00795.1.	0.402
secE	sync_0313	sync_2729	sync_0313	Preprotein translocase, SecE subunit; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.	Uncharacterized protein.	0.730
secE	sync_0890	sync_2729	sync_0890	Preprotein translocase, SecE subunit; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.	Conserved hypothetical protein.	0.663
secE	sync_0892	sync_2729	sync_0892	Preprotein translocase, SecE subunit; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.	Ferredoxin; Identified by match to protein family HMM PF00111.	0.705
secE	sync_1524	sync_2729	sync_1524	Preprotein translocase, SecE subunit; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.	Uncharacterized protein.	0.698
secE	sync_1559	sync_2729	sync_1559	Preprotein translocase, SecE subunit; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.	Conserved hypothetical protein; Identified by similarity to GB:AAQ00075.1.	0.739
secE	sync_2268	sync_2729	sync_2268	Preprotein translocase, SecE subunit; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.	Conserved hypothetical protein; Identified by similarity to GB:CAE21616.1.	0.652
secE	sync_2544	sync_2729	sync_2544	Preprotein translocase, SecE subunit; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.	Putative membrane protein; Identified by similarity to GB:CAE20354.1.	0.742
secE	sync_2559	sync_2729	sync_2559	Preprotein translocase, SecE subunit; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.	Conserved hypothetical protein.	0.691
sync_0215	rpoZ	sync_0215	sync_2269	Conserved hypothetical protein; Identified by similarity to GB:AAQ00795.1.	Putative DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.549