Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| sync_1001 | sync_2567 | sync_1001 | sync_2567 | Possible glucose 6-phosphate dehydrogenase effector OpcA. | Oligoketide cyclase/lipid transport protein homolog; Identified by match to protein family HMM PF03364. | 0.593 |
| sync_1039 | sync_1994 | sync_1039 | sync_1994 | PsbP; Identified by match to protein family HMM PF01789. | Identified by match to protein family HMM PF06485. | 0.768 |
| sync_1039 | sync_2096 | sync_1039 | sync_2096 | PsbP; Identified by match to protein family HMM PF01789. | Conserved hypothetical protein. | 0.772 |
| sync_1039 | sync_2567 | sync_1039 | sync_2567 | PsbP; Identified by match to protein family HMM PF01789. | Oligoketide cyclase/lipid transport protein homolog; Identified by match to protein family HMM PF03364. | 0.609 |
| sync_1039 | sync_2568 | sync_1039 | sync_2568 | PsbP; Identified by match to protein family HMM PF01789. | Zeta-carotene desaturase; Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7'. | 0.605 |
| sync_1039 | sync_2925 | sync_1039 | sync_2925 | PsbP; Identified by match to protein family HMM PF01789. | Uncharacterized membrane protein. | 0.754 |
| sync_1039 | thf1 | sync_1039 | sync_1419 | PsbP; Identified by match to protein family HMM PF01789. | Uncharacterized protein; May be involved in photosynthetic membrane biogenesis. | 0.762 |
| sync_1994 | sync_1039 | sync_1994 | sync_1039 | Identified by match to protein family HMM PF06485. | PsbP; Identified by match to protein family HMM PF01789. | 0.768 |
| sync_1994 | sync_2096 | sync_1994 | sync_2096 | Identified by match to protein family HMM PF06485. | Conserved hypothetical protein. | 0.770 |
| sync_1994 | sync_2567 | sync_1994 | sync_2567 | Identified by match to protein family HMM PF06485. | Oligoketide cyclase/lipid transport protein homolog; Identified by match to protein family HMM PF03364. | 0.592 |
| sync_1994 | sync_2568 | sync_1994 | sync_2568 | Identified by match to protein family HMM PF06485. | Zeta-carotene desaturase; Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7'. | 0.734 |
| sync_1994 | sync_2925 | sync_1994 | sync_2925 | Identified by match to protein family HMM PF06485. | Uncharacterized membrane protein. | 0.744 |
| sync_1994 | thf1 | sync_1994 | sync_1419 | Identified by match to protein family HMM PF06485. | Uncharacterized protein; May be involved in photosynthetic membrane biogenesis. | 0.744 |
| sync_2096 | sync_1039 | sync_2096 | sync_1039 | Conserved hypothetical protein. | PsbP; Identified by match to protein family HMM PF01789. | 0.772 |
| sync_2096 | sync_1994 | sync_2096 | sync_1994 | Conserved hypothetical protein. | Identified by match to protein family HMM PF06485. | 0.770 |
| sync_2096 | sync_2567 | sync_2096 | sync_2567 | Conserved hypothetical protein. | Oligoketide cyclase/lipid transport protein homolog; Identified by match to protein family HMM PF03364. | 0.629 |
| sync_2096 | sync_2568 | sync_2096 | sync_2568 | Conserved hypothetical protein. | Zeta-carotene desaturase; Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7'. | 0.731 |
| sync_2096 | sync_2925 | sync_2096 | sync_2925 | Conserved hypothetical protein. | Uncharacterized membrane protein. | 0.750 |
| sync_2096 | thf1 | sync_2096 | sync_1419 | Conserved hypothetical protein. | Uncharacterized protein; May be involved in photosynthetic membrane biogenesis. | 0.759 |
| sync_2566 | sync_2567 | sync_2566 | sync_2567 | Hypothetical protein; Identified by Glimmer2; putative. | Oligoketide cyclase/lipid transport protein homolog; Identified by match to protein family HMM PF03364. | 0.655 |
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