STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sync_2569Iron-sulfur cluster assembly accessory protein; Identified by match to protein family HMM PF01521; match to protein family HMM TIGR00049; Belongs to the HesB/IscA family. (130 aa)    
Predicted Functional Partners:
sync_1147
Glutaredoxin homolog; Identified by match to protein family HMM TIGR00365; Belongs to the glutaredoxin family. Monothiol subfamily.
 
 0.713
sync_2570
TPR-repeat protein, specific for cyanobacteria.
       0.680
sync_2571
Conserved hypothetical protein; Identified by similarity to GB:CAE22145.1.
       0.656
sync_2572
Conserved hypothetical protein.
       0.656
sync_2567
Oligoketide cyclase/lipid transport protein homolog; Identified by match to protein family HMM PF03364.
       0.594
sync_2568
Zeta-carotene desaturase; Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7'.
       0.594
spl1
NifS-like aminotransferase class-V; Identified by match to protein family HMM PF00266; match to protein family HMM PF01212.
 
  
 0.569
sync_0647
NifU domain protein; Identified by match to protein family HMM PF01106.
  
 
 0.564
nifS
Possible cysteine desulfurase (class-V aminotransferase family); Identified by match to protein family HMM PF00266.
 
  
 0.540
sync_2566
Hypothetical protein; Identified by Glimmer2; putative.
       0.464
Your Current Organism:
Synechococcus sp. CC9311
NCBI taxonomy Id: 64471
Other names: S. sp. CC9311
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.