Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
sync_2569Iron-sulfur cluster assembly accessory protein; Identified by match to protein family HMM PF01521; match to protein family HMM TIGR00049; Belongs to the HesB/IscA family. (130 aa)    
Predicted Functional Partners:
sync_2570
TPR-repeat protein, specific for cyanobacteria.
       0.677
sync_2571
Conserved hypothetical protein; Identified by similarity to GB:CAE22145.1.
       0.677
sync_2572
Conserved hypothetical protein.
       0.677
sync_0275
Glycine cleavage T-protein (aminomethyl transferase) superfamily protein; Identified by match to protein family HMM PF01571.
 
 
 0.647
sync_2567
Oligoketide cyclase/lipid transport protein homolog; Identified by match to protein family HMM PF03364.
       0.619
sync_2568
Zeta-carotene desaturase; Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7'.
       0.619
spl1
NifS-like aminotransferase class-V; Identified by match to protein family HMM PF00266; match to protein family HMM PF01212.
 
 
 0.618
nifS
Possible cysteine desulfurase (class-V aminotransferase family); Identified by match to protein family HMM PF00266.
 
 
 0.592
sync_2351
HEAT-like repeat containing protein; Identified by match to protein family HMM PF02985; match to protein family HMM PF03130.
    
 
 0.589
sync_0647
NifU domain protein; Identified by match to protein family HMM PF01106.
  
 
 0.571
Your Current Organism:
Synechococcus sp. CC9311
NCBI taxonomy Id: 64471
Other names: S. sp. CC9311
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