STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sync_2571Conserved hypothetical protein; Identified by similarity to GB:CAE22145.1. (400 aa)    
Predicted Functional Partners:
sync_2572
Conserved hypothetical protein.
 
     0.824
sync_2570
TPR-repeat protein, specific for cyanobacteria.
       0.808
sync_2457
Conserved hypothetical protein; Identified by similarity to GB:CAE21762.1.
 
     0.772
sync_2569
Iron-sulfur cluster assembly accessory protein; Identified by match to protein family HMM PF01521; match to protein family HMM TIGR00049; Belongs to the HesB/IscA family.
       0.656
sync_0314
Conserved hypothetical protein; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family.
  
     0.641
wcaG-4
NAD dependent epimerase/dehydratase; Identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF07993.
  
     0.626
sync_1289
Putative membrane protein, YjgP/YjgQ family protein; Identified by match to protein family HMM PF03739.
 
     0.616
secE
Preprotein translocase, SecE subunit; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.
  
     0.611
sync_0469
Conserved hypothetical protein; Identified by similarity to GB:CAE21879.1.
  
     0.575
sync_2124
AbrB family transciptional regulator.
  
     0.572
Your Current Organism:
Synechococcus sp. CC9311
NCBI taxonomy Id: 64471
Other names: S. sp. CC9311
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.