sync_2579 protein (Synechococcus sp. CC9311)

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second shell of interactors

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Score

sync_2579

Possible porin; Identified by match to protein family HMM PF00395; Belongs to the OprB family. (575 aa)

Predicted Functional Partners:

sync_2580

0.773

sync_0315

0.771

sync_0314

0.757

sync_2139

0.750

sync_1041

0.742

sync_2717

0.732

sync_0306

0.725

sync_2541

0.725

sync_2938

0.725

sync_2215

0.724

Your Current Organism:

Synechococcus sp. CC9311

NCBI taxonomy Id: 64471
Other names: S. sp. CC9311

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
sync_0306	sync_0315	Repeats containing protein.	Uncharacterized conserved membrane protein.	0.452
sync_0306	sync_1041	Repeats containing protein.	Putative RND family outer membrane efflux protein; Identified by match to protein family HMM PF02321.	0.718
sync_0306	sync_2139	Repeats containing protein.	Conserved hypothetical protein.	0.774
sync_0306	sync_2541	Repeats containing protein.	Possible RND family outer membrane efflux protein; Identified by match to protein family HMM PF02321.	0.460
sync_0306	sync_2579	Repeats containing protein.	Possible porin; Identified by match to protein family HMM PF00395; Belongs to the OprB family.	0.725
sync_0306	sync_2717	Repeats containing protein.	Possible general (type II) secretion pathway protein D precursor; Identified by match to protein family HMM PF00263; match to protein family HMM PF07660; Belongs to the bacterial secretin family.	0.680
sync_0306	sync_2938	Repeats containing protein.	Esterase/lipase/thioesterase family active site.	0.760
sync_0314	sync_0315	Conserved hypothetical protein; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family.	Uncharacterized conserved membrane protein.	0.955
sync_0314	sync_1041	Conserved hypothetical protein; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family.	Putative RND family outer membrane efflux protein; Identified by match to protein family HMM PF02321.	0.438
sync_0314	sync_2215	Conserved hypothetical protein; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family.	Membrane protein, OMP85 family protein; Identified by match to protein family HMM PF01103; match to protein family HMM PF07244.	0.715
sync_0314	sync_2541	Conserved hypothetical protein; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family.	Possible RND family outer membrane efflux protein; Identified by match to protein family HMM PF02321.	0.569
sync_0314	sync_2579	Conserved hypothetical protein; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family.	Possible porin; Identified by match to protein family HMM PF00395; Belongs to the OprB family.	0.757
sync_0314	sync_2717	Conserved hypothetical protein; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family.	Possible general (type II) secretion pathway protein D precursor; Identified by match to protein family HMM PF00263; match to protein family HMM PF07660; Belongs to the bacterial secretin family.	0.405
sync_0315	sync_0306	Uncharacterized conserved membrane protein.	Repeats containing protein.	0.452
sync_0315	sync_0314	Uncharacterized conserved membrane protein.	Conserved hypothetical protein; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family.	0.955
sync_0315	sync_1041	Uncharacterized conserved membrane protein.	Putative RND family outer membrane efflux protein; Identified by match to protein family HMM PF02321.	0.711
sync_0315	sync_2215	Uncharacterized conserved membrane protein.	Membrane protein, OMP85 family protein; Identified by match to protein family HMM PF01103; match to protein family HMM PF07244.	0.722
sync_0315	sync_2541	Uncharacterized conserved membrane protein.	Possible RND family outer membrane efflux protein; Identified by match to protein family HMM PF02321.	0.707
sync_0315	sync_2579	Uncharacterized conserved membrane protein.	Possible porin; Identified by match to protein family HMM PF00395; Belongs to the OprB family.	0.771
sync_0315	sync_2717	Uncharacterized conserved membrane protein.	Possible general (type II) secretion pathway protein D precursor; Identified by match to protein family HMM PF00263; match to protein family HMM PF07660; Belongs to the bacterial secretin family.	0.637