Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
sync_2646Unnamed protein product. (182 aa)    
Predicted Functional Partners:
mraW
S-adenosyl-methyltransferase MraW; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.
       0.780
sync_1332
Conserved hypothetical protein.
  
     0.721
sync_2015
Uncharacterized membrane protein.
  
     0.720
sync_2052
Conserved hypothetical protein.
  
     0.706
sync_0297
Conserved hypothetical protein.
  
     0.699
sync_1823
Conserved hypothetical protein; Identified by similarity to GB:CAE21610.1.
  
     0.692
sync_0118
Conserved hypothetical protein.
  
     0.669
sync_1615
Conserved hypothetical protein.
  
     0.665
sync_2938
Esterase/lipase/thioesterase family active site.
  
     0.662
sync_2918
Lipoprotein, putative; Identified by match to protein family HMM TIGR03042.
  
     0.656
Your Current Organism:
Synechococcus sp. CC9311
NCBI taxonomy Id: 64471
Other names: S. sp. CC9311
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