Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
menA1,4-dihydroxy-2-naphthoate phytyltransferase; Involved in the synthesis of phylloquinone (vitamin K1). Catalyzes the transfer of a prenyl chain to 2-carboxy-1,4- naphthoquinone; Belongs to the MenA family. Type 2 subfamily. (314 aa)    
Predicted Functional Partners:
sync_2511
NADH dehydrogenase, FAD-containing subunit; Identified by match to protein family HMM PF00070; match to protein family HMM PF07992.
  
 
 0.905
sync_2656
Isochorismate synthase; Identified by match to protein family HMM PF00425; match to protein family HMM TIGR00543.
 
   
 0.862
sync_1551
Solanesyl diphosphate synthase; Identified by match to protein family HMM PF00348; match to protein family HMM TIGR02749; Belongs to the FPP/GGPP synthase family.
 
  
 0.856
chlP
Geranylgeranyl reductase; Identified by match to protein family HMM TIGR02023; match to protein family HMM TIGR02028.
  
 
 0.812
menD
2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase; Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2- succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC).
 
   
 0.699
sync_2653
Putative O-succinylbenzoate--CoA ligase; Identified by match to protein family HMM TIGR01923.
 
   
 0.654
sync_2925
Uncharacterized membrane protein.
  
    0.645
sync_2650
Predicted thioesterase; Catalyzes the hydrolysis of 1,4-dihydroxy-2-naphthoyl-CoA (DHNA-CoA) to 1,4-dihydroxy-2-naphthoate (DHNA), a reaction involved in phylloquinone (vitamin K1) biosynthesis; Belongs to the 4-hydroxybenzoyl-CoA thioesterase family. DHNA-CoA hydrolase subfamily.
 
   
 0.631
thf1
Uncharacterized protein; May be involved in photosynthetic membrane biogenesis.
  
    0.629
sync_2150
Conserved hypothetical protein.
  
     0.629
Your Current Organism:
Synechococcus sp. CC9311
NCBI taxonomy Id: 64471
Other names: S. sp. CC9311
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