sync_2671 protein (Synechococcus sp. CC9311)

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second shell of interactors

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Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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Score

sync_2671

Identified by match to protein family HMM PF00563; match to protein family HMM PF00990; match to protein family HMM TIGR00254. (583 aa)

Predicted Functional Partners:

sync_1512

0.998

sync_0573

0.989

sync_2820

0.985

sync_1604

0.938

sync_1514

0.931

sync_1079

0.901

pmgA

0.878

sync_0012

0.875

sync_1635

0.850

sync_2745

0.770

Your Current Organism:

Synechococcus sp. CC9311

NCBI taxonomy Id: 64471
Other names: S. sp. CC9311

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
pmgA	sync_0012	sync_1580	sync_0012	pmgA protein; Identified by similarity to GB:BAA20429.1.	SpoIIE domain protein; Identified by match to protein family HMM PF07228.	0.968
pmgA	sync_0573	sync_1580	sync_0573	pmgA protein; Identified by similarity to GB:BAA20429.1.	Two-component hybrid sensor and regulator alr4878, putative; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518.	0.645
pmgA	sync_1079	sync_1580	sync_1079	pmgA protein; Identified by similarity to GB:BAA20429.1.	Sensory box histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF02518.	0.524
pmgA	sync_1512	sync_1580	sync_1512	pmgA protein; Identified by similarity to GB:BAA20429.1.	GGDEF/EAL domain protein; Identified by match to protein family HMM PF00563; match to protein family HMM PF00990; match to protein family HMM TIGR00254.	0.553
pmgA	sync_1514	sync_1580	sync_1514	pmgA protein; Identified by similarity to GB:BAA20429.1.	GGDEF domain protein; Identified by match to protein family HMM PF00990; match to protein family HMM TIGR00254.	0.459
pmgA	sync_1635	sync_1580	sync_1635	pmgA protein; Identified by similarity to GB:BAA20429.1.	STAS domain protein; Identified by match to protein family HMM PF01740; Belongs to the anti-sigma-factor antagonist family.	0.990
pmgA	sync_2671	sync_1580	sync_2671	pmgA protein; Identified by similarity to GB:BAA20429.1.	Identified by match to protein family HMM PF00563; match to protein family HMM PF00990; match to protein family HMM TIGR00254.	0.878
sync_0012	pmgA	sync_0012	sync_1580	SpoIIE domain protein; Identified by match to protein family HMM PF07228.	pmgA protein; Identified by similarity to GB:BAA20429.1.	0.968
sync_0012	sync_0573	sync_0012	sync_0573	SpoIIE domain protein; Identified by match to protein family HMM PF07228.	Two-component hybrid sensor and regulator alr4878, putative; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518.	0.703
sync_0012	sync_1079	sync_0012	sync_1079	SpoIIE domain protein; Identified by match to protein family HMM PF07228.	Sensory box histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF02518.	0.541
sync_0012	sync_1512	sync_0012	sync_1512	SpoIIE domain protein; Identified by match to protein family HMM PF07228.	GGDEF/EAL domain protein; Identified by match to protein family HMM PF00563; match to protein family HMM PF00990; match to protein family HMM TIGR00254.	0.564
sync_0012	sync_1635	sync_0012	sync_1635	SpoIIE domain protein; Identified by match to protein family HMM PF07228.	STAS domain protein; Identified by match to protein family HMM PF01740; Belongs to the anti-sigma-factor antagonist family.	0.964
sync_0012	sync_2671	sync_0012	sync_2671	SpoIIE domain protein; Identified by match to protein family HMM PF07228.	Identified by match to protein family HMM PF00563; match to protein family HMM PF00990; match to protein family HMM TIGR00254.	0.875
sync_0573	pmgA	sync_0573	sync_1580	Two-component hybrid sensor and regulator alr4878, putative; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518.	pmgA protein; Identified by similarity to GB:BAA20429.1.	0.645
sync_0573	sync_0012	sync_0573	sync_0012	Two-component hybrid sensor and regulator alr4878, putative; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518.	SpoIIE domain protein; Identified by match to protein family HMM PF07228.	0.703
sync_0573	sync_1079	sync_0573	sync_1079	Two-component hybrid sensor and regulator alr4878, putative; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518.	Sensory box histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF02518.	0.999
sync_0573	sync_1512	sync_0573	sync_1512	Two-component hybrid sensor and regulator alr4878, putative; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518.	GGDEF/EAL domain protein; Identified by match to protein family HMM PF00563; match to protein family HMM PF00990; match to protein family HMM TIGR00254.	0.968
sync_0573	sync_1514	sync_0573	sync_1514	Two-component hybrid sensor and regulator alr4878, putative; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518.	GGDEF domain protein; Identified by match to protein family HMM PF00990; match to protein family HMM TIGR00254.	0.653
sync_0573	sync_1604	sync_0573	sync_1604	Two-component hybrid sensor and regulator alr4878, putative; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518.	GAF domain protein; Identified by match to protein family HMM PF01590.	0.494
sync_0573	sync_1635	sync_0573	sync_1635	Two-component hybrid sensor and regulator alr4878, putative; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518.	STAS domain protein; Identified by match to protein family HMM PF01740; Belongs to the anti-sigma-factor antagonist family.	0.685