sync_2672 protein (Synechococcus sp. CC9311)

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Score

sync_2672

Hypothetical protein; Identified by Glimmer2; putative. (637 aa)

Predicted Functional Partners:

sync_0156

0.940

sync_2675

0.933

sync_2673

0.917

sync_0154

0.871

polA

0.840

sync_2674

0.778

rplF

0.642

sync_0184

0.641

acpP

0.620

rpsD

0.576

Your Current Organism:

Synechococcus sp. CC9311

NCBI taxonomy Id: 64471
Other names: S. sp. CC9311

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
acpP	polA	sync_0132	sync_0928	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.	0.492
acpP	sync_0154	sync_0132	sync_0154	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	Membrane protein, putative.	0.994
acpP	sync_0156	sync_0132	sync_0156	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	Polyketide synthase, putative; Identified by match to protein family HMM PF00106; match to protein family HMM PF00107; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02801; match to protein family HMM PF07993; match to protein family HMM TIGR01746.	0.796
acpP	sync_2672	sync_0132	sync_2672	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	Hypothetical protein; Identified by Glimmer2; putative.	0.620
polA	acpP	sync_0928	sync_0132	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	0.492
polA	sync_0154	sync_0928	sync_0154	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.	Membrane protein, putative.	0.501
polA	sync_0156	sync_0928	sync_0156	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.	Polyketide synthase, putative; Identified by match to protein family HMM PF00106; match to protein family HMM PF00107; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02801; match to protein family HMM PF07993; match to protein family HMM TIGR01746.	0.826
polA	sync_2672	sync_0928	sync_2672	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.	Hypothetical protein; Identified by Glimmer2; putative.	0.840
rplF	rpsD	sync_0423	sync_0629	Ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.	Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.	0.996
rplF	sync_2672	sync_0423	sync_2672	Ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.	Hypothetical protein; Identified by Glimmer2; putative.	0.642
rpsD	rplF	sync_0629	sync_0423	Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.	Ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.	0.996
rpsD	sync_0156	sync_0629	sync_0156	Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.	Polyketide synthase, putative; Identified by match to protein family HMM PF00106; match to protein family HMM PF00107; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02801; match to protein family HMM PF07993; match to protein family HMM TIGR01746.	0.508
rpsD	sync_2672	sync_0629	sync_2672	Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.	Hypothetical protein; Identified by Glimmer2; putative.	0.576
sync_0154	acpP	sync_0154	sync_0132	Membrane protein, putative.	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	0.994
sync_0154	polA	sync_0154	sync_0928	Membrane protein, putative.	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.	0.501
sync_0154	sync_0156	sync_0154	sync_0156	Membrane protein, putative.	Polyketide synthase, putative; Identified by match to protein family HMM PF00106; match to protein family HMM PF00107; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02801; match to protein family HMM PF07993; match to protein family HMM TIGR01746.	0.999
sync_0154	sync_0184	sync_0154	sync_0184	Membrane protein, putative.	Hypothetical protein; Identified by Glimmer2; putative.	0.540
sync_0154	sync_2672	sync_0154	sync_2672	Membrane protein, putative.	Hypothetical protein; Identified by Glimmer2; putative.	0.871
sync_0156	acpP	sync_0156	sync_0132	Polyketide synthase, putative; Identified by match to protein family HMM PF00106; match to protein family HMM PF00107; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02801; match to protein family HMM PF07993; match to protein family HMM TIGR01746.	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	0.796
sync_0156	polA	sync_0156	sync_0928	Polyketide synthase, putative; Identified by match to protein family HMM PF00106; match to protein family HMM PF00107; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02801; match to protein family HMM PF07993; match to protein family HMM TIGR01746.	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.	0.826